APOE

Basic Information

Gene Symbol	APOE
Entrez Id	348
Position	chr19:45409039..45412650
Description	apolipoprotein E
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs405509	19:45408836	T/G	APOE	near-gene-5	0.942	0.99581	0.0109	0.7004		1f
rs449647	19:45408564	A/T	APOE	near-gene-5	0.757	0.99700	0.0165	0.8545		5
rs7259620	19:45407788	A/G	APOE	near-gene-5	0.950	1.00371	0.0109	0.737		4
rs769449	19:45410002	A/G	APOE	intron	0.902	1.01217	0.0170	0.4776		4
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information