C4orf27

Basic Information

Gene Symbol	C4orf27
Entrez Id	54969
Position	chr4:170650619..170679093
Description	chromosome 4 open reading frame 27
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10001076	4:170663769	T/C	C4orf27	intron	0.709	0.99372	0.0210	0.7655		7
rs10012711	4:170663759	A/C	C4orf27	intron	0.709	1.01471	0.0268	0.5861		7
rs10016129	4:170673846	T/C	C4orf27	intron	0.980	0.98659	0.0136	0.3224		6
rs10018221	4:170664777	T/C	C4orf27	intron	0.989	1.01786	0.0133	0.1821		6
rs10020331	4:170670592	T/C	C4orf27	intron	0.991	1.01461	0.0136	0.286		7
rs10021555	4:170665961	T/C	C4orf27	intron	0.992	1.01674	0.0132	0.211		5
rs10029498	4:170666194	A/G	C4orf27	intron	0.991	0.98314	0.0132	0.1983		6
rs10034188	4:170676306	A/G	C4orf27	intron	0.960	1.01440	0.0138	0.3		7
rs112461853	4:170673471	T/C	C4orf27	intron	0.948	1.01157	0.0341	0.7359		7
rs11733986	4:170673242	A/T	C4orf27	intron	0.983	1.01806	0.0142	0.2071		7
rs13122912	4:170676328	A/G	C4orf27	intron	0.963	0.98472	0.0135	0.2537		7
rs13141011	4:170653497	A/G	C4orf27	intron	0.944	1.05306	0.0155	0.0008773		7
rs13151680	4:170672994	A/G	C4orf27	intron	0.966	0.98472	0.0396	0.6963		6
rs139232832	4:170673630	A/G	C4orf27	intron	0.947	1.03634	0.0503	0.4776		-
rs143273035	4:170667972	A/G	C4orf27	intron	0.958	0.96454	0.0497	0.4673		-
rs1542872	4:170657367	A/G	C4orf27	intron	0.949	0.98334	0.0303	0.5786		6
rs17055114	4:170658731	A/G	C4orf27	intron	0.979	0.98098	0.0134	0.1524		6
rs17055115	4:170661750	A/T	C4orf27	intron	0.981	1.01633	0.0150	0.2808		6
rs17055122	4:170675646	A/C	C4orf27	intron	0.961	0.98423	0.0395	0.6869		6
rs17628004	4:170653643	A/G	C4orf27	intron	0.991	1.04571	0.0109	0.00004422		6
rs17628016	4:170658092	A/G	C4orf27	intron	0.983	1.02000	0.0146	0.1739		6
rs183834244	4:170675326	A/T	C4orf27	intron	0.693	1.00501	0.0497	0.9205		-
rs184960612	4:170663748	T/C	C4orf27	intron	0.641	0.88382	0.0669	0.0648		-
rs185389771	4:170658534	A/C	C4orf27	intron	0.720	0.97981	0.0630	0.7454		-
rs192651942	4:170668840	A/G	C4orf27	intron	0.696	1.00461	0.0503	0.9274		-
rs1971326	4:170657258	A/G	C4orf27	intron	0.964	0.97893	0.0335	0.5252		7
rs2331721	4:170668031	T/C	C4orf27	intron	0.986	0.98462	0.0143	0.2794		6
rs28631486	4:170663740	A/G	C4orf27	intron	0.836	0.98639	0.0184	0.4576		6
rs2877469	4:170668341	A/C	C4orf27	intron	0.990	1.01471	0.0136	0.2807		7
rs35218368	4:170676095	A/G	C4orf27	intron	0.769	1.05591	0.0339	0.1086		7
rs35744315	4:170669824	A/C	C4orf27	intron	0.988	0.98511	0.0134	0.2624		6
rs35846719	4:170662301	A/C	C4orf27	intron	0.968	1.01167	0.0403	0.7728		7
rs35962500	4:170674146	T/C	C4orf27	intron	0.964	1.01552	0.0396	0.6966		6
rs4692741	4:170651797	A/T	C4orf27	intron	0.962	1.01918	0.0333	0.5686		6
rs4692742	4:170651811	T/C	C4orf27	intron	0.997	0.95542	0.0109	0.00002871		7
rs60578368	4:170657341	A/G	C4orf27	intron	0.981	1.02051	0.0146	0.1641		7
rs6553453	4:170662627	T/C	C4orf27	intron	0.972	1.01745	0.0335	0.6049		6
rs6553454	4:170666195	T/G	C4orf27	intron	0.966	0.99561	0.0388	0.9107		6
rs6832007	4:170657998	T/C	C4orf27	intron	0.985	0.98226	0.0139	0.1961		7
rs6832030	4:170658030	T/C	C4orf27	intron	0.959	0.99213	0.0241	0.7433		7
rs6849004	4:170663321	C/G	C4orf27	intron	0.970	1.01704	0.0337	0.6156		7
rs6850430	4:170658028	T/C	C4orf27	intron	0.962	1.00803	0.0241	0.7404		7
rs6850446	4:170658049	T/C	C4orf27	intron	0.956	0.97385	0.0329	0.4198		7
rs6854083	4:170654648	A/G	C4orf27	intron	0.930	0.98364	0.0258	0.5228		6
rs71622355	4:170655968	A/G	C4orf27	intron	0.770	1.06099	0.0342	0.08384		7
rs71643129	4:170661980	T/C	C4orf27	intron	0.964	1.00844	0.0408	0.8368		6
rs72696674	4:170651987	T/G	C4orf27	intron	0.941	1.01593	0.0309	0.6084		6
rs72696684	4:170660605	A/C	C4orf27	intron	0.951	0.97590	0.0261	0.3489		7
rs72976699	4:170661163	T/G	C4orf27	intron	0.980	0.98482	0.0150	0.3071		6
rs74541080	4:170651423	A/G	C4orf27	intron	0.942	1.01532	0.0310	0.6246		5
rs7691713	4:170658420	T/G	C4orf27	intron	0.963	0.98926	0.0199	0.5883		7
rs79468179	4:170665473	A/G	C4orf27	intron	0.914	1.01086	0.0442	0.8067		7
rs9942227	4:170669247	A/T	C4orf27	intron	0.964	1.00511	0.0388	0.8944		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information