CCDC144CP

Basic Information

Gene Symbol	CCDC144CP
Entrez Id	348254
Position	chr17:20224487..20305504
Description	coiled-coil domain containing 144C, pseudogene
Gene type	pseudo

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10451315	17:20251815	A/T	CCDC144CP	intron	0.968	1.01461	0.0141	0.3016		6
rs111285254	17:20261101	A/G	CCDC144CP	intron	0.944	1.03759	0.0111	0.0009135		7
rs111808515	17:20289705	T/C	CCDC144CP	intron	0.973	1.03004	0.0162	0.06703		7
rs112676454	17:20260998	T/C	CCDC144CP	intron	0.746	1.01826	0.0123	0.1419		7
rs137883058	17:20272950	T/C	CCDC144CP	intron	0.755	1.03614	0.0236	0.1327		-
rs138032425	17:20236409	T/C	CCDC144CP	intron	0.611	0.91677	0.0568	0.1264		-
rs138192739	17:20238312	A/G	CCDC144CP	intron	0.924	1.07369	0.0210	0.0007037		-
rs138812084	17:20296549	A/G	CCDC144CP	intron	0.920	1.00944	0.0147	0.5231		-
rs139534560	17:20249368	C/G	CCDC144CP	intron	0.948	0.96069	0.0111	0.0003137		-
rs139896939	17:20265887	A/G	CCDC144CP	intron	0.978	1.01268	0.0139	0.3636		-
rs140206542	17:20301993	A/T	CCDC144CP	intron	0.921	1.01390	0.0146	0.346		-
rs140322197	17:20236788	C/G	CCDC144CP	intron	0.999	0.97912	0.0252	0.4029		-
rs140460235	17:20302213	T/C	CCDC144CP	intron	0.911	0.97814	0.0241	0.3584		-
rs141472072	17:20275447	A/G	CCDC144CP	intron	0.953	0.97981	0.0261	0.4334		-
rs142081982	17:20230651	A/T	CCDC144CP	intron	0.987	0.98629	0.0256	0.5907		-
rs142489064	17:20285549	T/C	CCDC144CP	intron	0.722	1.02429	0.0253	0.3424		-
rs143042302	17:20254598	A/G	CCDC144CP	ncRNA	0.979	0.98590	0.0139	0.3056		-
rs143892230	17:20301999	A/T	CCDC144CP	intron	0.921	1.01450	0.0146	0.3265		-
rs145800871	17:20289594	T/C	CCDC144CP	intron	0.910	1.07993	0.0215	0.000358		-
rs146319929	17:20230677	C/G	CCDC144CP	intron	0.930	0.97083	0.0158	0.0601		-
rs146373953	17:20258838	T/G	CCDC144CP	intron	0.659	1.02521	0.0135	0.065		-
rs146621901	17:20251281	A/G	CCDC144CP	intron	0.972	0.98049	0.0259	0.4473		-
rs148088458	17:20290829	A/G	CCDC144CP	intron	0.949	0.97824	0.0262	0.4017		-
rs148158211	17:20229349	A/G	CCDC144CP	intron	0.945	0.93529	0.0209	0.001355		-
rs149074404	17:20268754	A/G	CCDC144CP	ncRNA	0.696	1.01106	0.0141	0.432		-
rs149591711	17:20286308	A/G	CCDC144CP	intron	0.910	1.04666	0.0182	0.01249		-
rs16941857	17:20292395	A/G	CCDC144CP	intron	0.974	0.97239	0.0162	0.08449		5
rs182077859	17:20250693	A/G	CCDC144CP	intron	0.612	1.11728	0.0605	0.06672		-
rs189623790	17:20296552	A/G	CCDC144CP	intron	0.913	1.02614	0.0169	0.1274		-
rs191198466	17:20234505	T/G	CCDC144CP	intron	0.998	0.98020	0.0253	0.428		-
rs192628423	17:20280522	C/G	CCDC144CP	intron	0.953	0.97746	0.0262	0.3835		-
rs2254952	17:20258890	T/C	CCDC144CP	intron	0.913	1.02644	0.0113	0.02056		6
rs2261959	17:20228407	T/C	CCDC144CP	intron	0.812	1.02953	0.0118	0.01344		6
rs2543917	17:20234527	A/G	CCDC144CP	intron	0.914	0.97395	0.0112	0.01881		7
rs2586638	17:20283052	A/G	CCDC144CP	intron	0.620	0.93725	0.0372	0.08205		6
rs2694234	17:20291735	T/C	CCDC144CP	intron	0.939	0.98413	0.0146	0.273		5
rs3855825	17:20230781	T/C	CCDC144CP	intron	0.800	0.99810	0.0120	0.8737		7
rs3874846	17:20297545	T/G	CCDC144CP	intron	0.668	0.97443	0.0143	0.06959		7
rs3910761	17:20288098	A/G	CCDC144CP	intron	0.904	1.03967	0.0114	0.0006317		7
rs4003696	17:20245289	T/G	CCDC144CP	intron	0.956	1.03987	0.0111	0.0004202		6
rs4003767	17:20285571	A/G	CCDC144CP	intron	0.885	0.97307	0.0115	0.01739		5
rs4003797	17:20288900	T/C	CCDC144CP	intron	0.859	1.02624	0.0116	0.02562		7
rs4087266	17:20283181	A/C	CCDC144CP	intron	0.974	0.98167	0.0253	0.4656		7
rs58540723	17:20231161	A/G	CCDC144CP	intron	0.872	0.99312	0.0118	0.5574		5
rs62066892	17:20293565	A/G	CCDC144CP	intron	0.751	1.04540	0.0124	0.0003292		7
rs67217337	17:20236432	T/C	CCDC144CP	intron	0.948	0.96165	0.0111	0.0004226		7
rs71372302	17:20230622	T/G	CCDC144CP	intron	0.890	1.03624	0.0117	0.002355		7
rs7216866	17:20263038	T/G	CCDC144CP	intron	0.921	1.02768	0.0113	0.01563		6
rs75417978	17:20246025	C/G	CCDC144CP	intron	0.927	0.95801	0.0113	0.000149		7
rs76318241	17:20260482	C/G	CCDC144CP	intron	0.896	0.99392	0.0119	0.6048		7
rs76953022	17:20285917	A/G	CCDC144CP	intron	0.767	1.03998	0.0127	0.002085		7
rs78350404	17:20237261	A/G	CCDC144CP	intron	0.981	1.02727	0.0158	0.08793		7
rs8070754	17:20267196	A/G	CCDC144CP	intron	0.809	0.97297	0.0119	0.02096		7
rs8078442	17:20239827	A/G	CCDC144CP	intron	0.976	1.01582	0.0241	0.5147		7
rs9897228	17:20245073	C/G	CCDC144CP	intron	0.888	1.02521	0.0113	0.02789		7
rs9897871	17:20291779	T/C	CCDC144CP	intron	0.931	0.98699	0.0150	0.3814		5
rs9907573	17:20302045	T/C	CCDC144CP	intron	0.842	0.97599	0.0116	0.03698		7
rs9909852	17:20291019	A/G	CCDC144CP	intron	0.980	1.01593	0.0137	0.2495		5
rs9912844	17:20291257	A/G	CCDC144CP	intron	0.917	0.96348	0.0113	0.0009769		7
rs9913394	17:20227797	A/G	CCDC144CP	intron	0.979	0.98423	0.0138	0.2504		7
rs9913818	17:20227953	A/G	CCDC144CP	intron	0.930	1.02768	0.0112	0.01457		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information