CENPT

Basic Information

Gene Symbol	CENPT
Entrez Id	80152
Position	chr16:67862060..67881361
Description	centromere protein T
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs13333317	16:67872251	A/C	CENPT	intron	1.000	0.92192	0.0249	0.001099		7
rs13336148	16:67874078	A/G	CENPT	intron	1.000	1.08448	0.0250	0.001152		6
rs143399800	16:67872340	T/C	CENPT	intron	0.996	1.08329	0.0260	0.002102		-
rs149132030	16:67870806	A/G	CENPT	intron,near-gene-5	0.719	1.07864	0.0453	0.09454		-
rs72790366	16:67870279	A/C	CENPT	intron,near-gene-5	0.744	0.99422	0.0341	0.8659		6
rs73593810	16:67866783	T/C	CENPT	intron	0.997	1.04123	0.0163	0.01348		5
rs77335546	16:67868394	T/C	CENPT	intron,near-gene-5	0.999	1.08491	0.0260	0.001748		7
rs78575122	16:67869541	A/G	CENPT	near-gene-5,untranslated-5	0.999	1.08480	0.0260	0.001757		7
rs8060967	16:67871501	T/C	CENPT	intron,near-gene-5	0.993	1.03697	0.0165	0.02809		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information