CILP2

Basic Information

Gene Symbol	CILP2
Entrez Id	148113
Position	chr19:19649074..19657468
Description	cartilage intermediate layer protein 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1036215	19:19657198	T/C	CILP2	untranslated-3	0.998	1.05369	0.0145	0.000321		5
rs10402308	19:19657500	A/G	CILP2	near-gene-3	0.981	1.04394	0.0133	0.001283		2b
rs112394473	19:19652234	T/G	CILP2	intron	0.912	1.04091	0.0407	0.3242		4
rs12981405	19:19651577	T/C	CILP2	intron	0.990	1.04550	0.0138	0.001205		4
rs2304097	19:19657143	T/C	CILP2	untranslated-3	0.966	1.01420	0.0516	0.7852		5
rs34067609	19:19653524	A/G	CILP2	intron	0.989	1.05612	0.0146	0.0001848		5
rs45556231	19:19654189	A/G	CILP2	coding-synon	1.000	1.05675	0.0144	0.0001316		5
rs4808208	19:19650096	A/G	CILP2	intron	0.991	0.93998	0.0111	2.108E-8		5
rs4808970	19:19651140	A/G	CILP2	coding-synon	0.998	0.94781	0.0145	0.0002185		4
rs61744761	19:19656615	T/C	CILP2	coding-synon	0.997	1.05338	0.0145	0.0003288		5
rs73924805	19:19657590	T/C	CILP2	near-gene-3	0.943	0.97054	0.0249	0.23		4
rs76790018	19:19652157	A/G	CILP2	intron	1.000	1.05654	0.0144	0.0001347		4
rs77427798	19:19652982	T/C	CILP2	intron	1.000	0.94639	0.0144	0.0001302		5
rs77616520	19:19652776	A/G	CILP2	intron	1.000	1.05654	0.0144	0.0001346		2b
rs79765293	19:19657041	A/G	CILP2	untranslated-3	0.620	0.98590	0.0409	0.7278		5
rs8102502	19:19652746	T/C	CILP2	intron	1.000	0.94961	0.0140	0.0002207		4
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information