CLCN3

Basic Information

Gene Symbol	CLCN3
Entrez Id	1182
Position	chr4:170541722..170642157
Description	chloride channel, voltage-sensitive 3
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10002133	4:170563733	A/G	CLCN3	intron	0.997	1.05717	0.0126	9.38E-6		7
rs10008199	4:170578540	T/C	CLCN3	intron	0.996	0.98847	0.0189	0.5411		6
rs10021041	4:170545419	A/G	CLCN3	intron	0.986	1.05844	0.0127	7.175E-6		6
rs10023330	4:170558032	T/C	CLCN3	intron	0.997	1.05728	0.0125	8.461E-6		7
rs10213390	4:170612340	T/G	CLCN3	intron	0.991	0.98590	0.0190	0.4535		6
rs10222938	4:170598148	A/G	CLCN3	intron	0.979	1.01187	0.0189	0.5335		6
rs10520159	4:170581226	A/G	CLCN3	intron,near-gene-5,untranslated-5	0.996	1.01025	0.0190	0.5905		4
rs10520160	4:170582468	A/G	CLCN3	intron	0.856	0.94535	0.0370	0.1284		5
rs10520161	4:170583665	A/T	CLCN3	intron	1.000	0.97590	0.0156	0.1177		5
rs10520162	4:170602499	A/G	CLCN3	intron	1.000	0.97668	0.0156	0.1309		6
rs10520163	4:170626552	T/C	CLCN3	intron	0.995	1.06279	0.0106	1.02E-8		6
rs10520164	4:170626898	T/C	CLCN3	intron	1.000	1.02757	0.0160	0.08829		6
rs10866341	4:170568789	A/G	CLCN3	intron	1.000	1.05686	0.0116	1.817E-6		7
rs111313543	4:170603406	A/G	CLCN3	intron	0.705	1.03842	0.0247	0.1266		5
rs11132810	4:170534100	A/C	CLCN3	near-gene-5	0.780	1.03873	0.0140	0.006547		5
rs111543507	4:170620926	A/G	CLCN3	intron	0.990	1.02378	0.0230	0.3074		7
rs111582472	4:170611521	T/C	CLCN3	intron	0.972	1.00803	0.0324	0.8063		6
rs111761884	4:170605122	A/G	CLCN3	intron	0.979	1.08350	0.0529	0.1295		6
rs111850317	4:170620871	A/G	CLCN3	intron	0.971	1.00723	0.0325	0.8243		6
rs111859532	4:170593224	A/G	CLCN3	intron	0.995	1.01177	0.0191	0.5387		7
rs111884490	4:170564556	T/C	CLCN3	intron	0.988	0.97171	0.0216	0.184		7
rs112202884	4:170592734	A/C	CLCN3	intron	0.997	1.01025	0.0190	0.5914		7
rs112272756	4:170617331	T/C	CLCN3	intron	0.658	0.98157	0.0364	0.6087		6
rs112440231	4:170593145	A/G	CLCN3	intron	0.999	1.02419	0.0156	0.1263		7
rs112894450	4:170551970	A/G	CLCN3	intron	0.980	1.02143	0.0235	0.3656		7
rs113202729	4:170577420	T/C	CLCN3	intron	0.887	1.03417	0.0310	0.278		7
rs113230294	4:170611542	C/G	CLCN3	intron	0.992	0.98738	0.0191	0.5044		7
rs113274113	4:170612344	T/G	CLCN3	intron	0.972	1.00803	0.0324	0.8064		6
rs113446137	4:170600823	C/G	CLCN3	intron	0.975	1.01005	0.0323	0.7562		7
rs113841075	4:170545431	T/C	CLCN3	intron	0.991	1.03107	0.0219	0.1616		7
rs114182641	4:170612988	A/G	CLCN3	intron	0.681	1.00030	0.0482	0.9951		7
rs114261344	4:170578249	A/G	CLCN3	intron	0.840	1.02870	0.0526	0.5908		6
rs115092174	4:170571046	A/G	CLCN3	intron	0.704	1.06152	0.0389	0.125		5
rs115182131	4:170601658	A/G	CLCN3	intron	0.669	1.05264	0.0554	0.3546		7
rs115477840	4:170600144	A/C	CLCN3	intron	0.963	0.94762	0.0108	6.366E-7		7
rs115619306	4:170605063	T/G	CLCN3	intron	0.661	1.03987	0.0282	0.1653		7
rs115850822	4:170573650	A/T	CLCN3	intron	0.683	0.89137	0.0388	0.003079		7
rs115905092	4:170588342	A/G	CLCN3	intron	0.840	0.97006	0.0525	0.5627		5
rs116066997	4:170556121	T/G	CLCN3	intron	0.728	0.95352	0.0259	0.06585		4
rs116835609	4:170644190	A/G	CLCN3	untranslated-3	0.664	0.89163	0.0470	0.01472		7
rs11722212	4:170534428	A/G	CLCN3	near-gene-5	0.976	0.96117	0.0214	0.06454		4
rs11723638	4:170539726	T/C	CLCN3	near-gene-5	0.662	0.97531	0.0461	0.5882		4
rs11726813	4:170577248	T/C	CLCN3	intron	0.996	1.01005	0.0190	0.5975		7
rs11727266	4:170579383	A/T	CLCN3	intron,near-gene-5	0.987	0.99134	0.0192	0.649		6
rs11727690	4:170623554	A/G	CLCN3	intron	0.990	1.01288	0.0191	0.5037		7
rs11727839	4:170577902	T/C	CLCN3	intron	0.996	1.00955	0.0190	0.6176		7
rs11733111	4:170606832	A/G	CLCN3	intron	0.998	0.98462	0.0192	0.4174		5
rs11931360	4:170592454	A/T	CLCN3	intron	1.000	1.02368	0.0156	0.1338		7
rs11933931	4:170580637	T/C	CLCN3	intron,near-gene-5	0.997	1.05643	0.0106	2.523E-7		4
rs11935607	4:170540000	A/G	CLCN3	near-gene-5	0.992	1.03293	0.0132	0.01393		7
rs11937417	4:170549935	A/G	CLCN3	intron	1.000	0.94838	0.0110	1.302E-6		3a
rs11940555	4:170609514	T/C	CLCN3	intron	0.999	0.97707	0.0156	0.1369		6
rs11940982	4:170610875	A/G	CLCN3	intron	0.998	0.97668	0.0156	0.1311		5
rs11941753	4:170578421	A/G	CLCN3	intron	1.000	0.97638	0.0156	0.1252		6
rs11944742	4:170560858	A/G	CLCN3	intron	1.000	0.97580	0.0156	0.1153		6
rs11946332	4:170623982	C/G	CLCN3	intron	0.999	0.97297	0.0160	0.08628		7
rs12330960	4:170621973	A/G	CLCN3	intron	0.998	0.97219	0.0159	0.07626		7
rs12501499	4:170541206	T/C	CLCN3	near-gene-5	0.987	1.03749	0.0218	0.09172		2b
rs12511877	4:170590389	A/G	CLCN3	intron	0.997	1.05950	0.0106	5.34E-8		6
rs13102795	4:170600832	T/G	CLCN3	intron	0.994	1.05559	0.0125	0.00001628		7
rs13103267	4:170631146	A/G	CLCN3	intron	0.985	1.05295	0.0122	0.00002243		6
rs13103449	4:170621687	A/G	CLCN3	intron	0.979	0.91962	0.0530	0.1141		7
rs13106440	4:170617075	A/G	CLCN3	intron	0.980	0.91925	0.0530	0.1123		6
rs13108826	4:170568366	T/C	CLCN3	intron	0.990	1.05770	0.0127	9.436E-6		7
rs13115372	4:170635636	A/G	CLCN3	intron	0.980	0.95009	0.0122	0.00002646		7
rs13120831	4:170562598	A/G	CLCN3	intron	0.997	1.05696	0.0126	0.00001029		7
rs13124022	4:170588145	T/G	CLCN3	intron	0.996	1.05717	0.0125	8.489E-6		5
rs13136720	4:170565154	T/G	CLCN3	intron	1.000	0.94592	0.0116	1.635E-6		7
rs13143993	4:170579399	T/C	CLCN3	intron,near-gene-5	0.993	0.94507	0.0126	6.88E-6		6
rs13145908	4:170566470	C/G	CLCN3	intron	0.992	0.94781	0.0126	0.00002232		7
rs13152741	4:170545039	T/C	CLCN3	intron	0.995	0.94630	0.0125	0.00001063		6
rs13434675	4:170590940	A/G	CLCN3	intron	0.997	1.01167	0.0189	0.5384		7
rs13435226	4:170550825	T/C	CLCN3	intron	0.998	0.94649	0.0125	0.00001121		7
rs13435853	4:170590989	A/G	CLCN3	intron	0.997	0.98817	0.0189	0.5297		7
rs137968407	4:170546087	T/C	CLCN3	intron	0.859	0.94876	0.0216	0.01489		-
rs143098499	4:170558701	A/C	CLCN3	intron	0.955	1.02870	0.0468	0.5454		-
rs143283084	4:170578209	A/G	CLCN3	intron	0.622	0.82597	0.0651	0.003334		-
rs144075422	4:170571095	A/G	CLCN3	intron	0.687	0.89664	0.0390	0.005165		-
rs144395233	4:170600332	A/G	CLCN3	intron	0.985	1.05538	0.0127	0.00002079		-
rs147108460	4:170533981	A/C	CLCN3	near-gene-5	0.641	1.06887	0.0563	0.2361		-
rs147242889	4:170610624	T/C	CLCN3	intron	0.806	0.98610	0.0359	0.6972		-
rs147735184	4:170629734	T/C	CLCN3	intron	0.809	1.01369	0.0365	0.7087		-
rs148092973	4:170573946	T/C	CLCN3	intron	0.799	0.95066	0.0548	0.3554		-
rs149287207	4:170638416	A/G	CLCN3	intron	0.898	1.02296	0.0271	0.4011		-
rs150833321	4:170605965	A/G	CLCN3	intron	0.666	1.12772	0.0457	0.00855		-
rs1566522	4:170628474	A/G	CLCN3	intron	0.991	1.06226	0.0107	1.498E-8		6
rs17051938	4:170612814	T/C	CLCN3	intron	0.992	1.01268	0.0191	0.5104		7
rs17055059	4:170561159	A/G	CLCN3	intron	0.983	0.99124	0.0303	0.7701		7
rs17055061	4:170561682	T/C	CLCN3	intron	0.996	1.02061	0.0229	0.3745		5
rs17055064	4:170561864	T/C	CLCN3	intron	0.997	0.97219	0.0217	0.193		4
rs17055068	4:170570653	A/G	CLCN3	intron	0.997	0.97171	0.0216	0.1848		7
rs17055075	4:170573296	A/G	CLCN3	intron	0.997	0.97249	0.0217	0.198		7
rs17055093	4:170626391	T/C	CLCN3	intron	0.990	1.01278	0.0191	0.5048		6
rs17055097	4:170633451	A/C	CLCN3	intron	0.987	1.01319	0.0191	0.4944		6
rs17545251	4:170555409	T/C	CLCN3	intron	0.999	0.97883	0.0155	0.167		6
rs17627637	4:170540794	T/C	CLCN3	near-gene-5	0.898	0.94412	0.0179	0.001311		4
rs17627781	4:170564316	A/G	CLCN3	intron	0.674	1.03780	0.0284	0.1908		7
rs17627811	4:170579002	A/C	CLCN3	intron	0.995	0.94403	0.0106	6.22E-8		5
rs17627829	4:170579585	A/G	CLCN3	intron,near-gene-5	1.000	0.97648	0.0156	0.1263		1f
rs17659581	4:170559440	T/C	CLCN3	intron	0.809	1.04959	0.0149	0.001176		7
rs17659801	4:170632482	A/G	CLCN3	intron	0.997	0.97278	0.0160	0.08436		7
rs181185001	4:170588341	T/C	CLCN3	intron	0.872	0.98255	0.0551	0.7486		-
rs181525169	4:170600221	T/C	CLCN3	intron	0.986	1.01207	0.0190	0.5271		-
rs181990952	4:170600538	A/G	CLCN3	intron	0.994	1.05570	0.0125	0.0000158		-
rs182553077	4:170545080	T/G	CLCN3	intron	0.927	0.98995	0.0592	0.8648		-
rs183748191	4:170630589	T/C	CLCN3	intron	0.824	1.00451	0.0418	0.9151		-
rs185430742	4:170545095	T/C	CLCN3	intron	0.927	1.01015	0.0592	0.8647		-
rs186184020	4:170578363	A/G	CLCN3	intron	0.869	0.98659	0.0555	0.8072		-
rs192505571	4:170556630	A/T	CLCN3	intron	0.956	1.08459	0.0553	0.142		-
rs1966021	4:170602224	A/G	CLCN3	intron	1.000	1.02368	0.0156	0.1347		7
rs2047652	4:170610810	A/G	CLCN3	intron	0.972	0.91530	0.0516	0.08648		5
rs2062611	4:170635604	A/C	CLCN3	intron	0.982	0.94167	0.0107	2.022E-8		7
rs2173825	4:170605538	A/G	CLCN3	intron	1.000	1.02368	0.0156	0.1336		6
rs2270863	4:170611981	A/G	CLCN3	intron	0.988	1.06046	0.0107	3.957E-8		6
rs2331719	4:170589136	T/C	CLCN3	intron	0.986	0.94649	0.0107	2.811E-7		6
rs28364750	4:170580777	T/C	CLCN3	intron,near-gene-5	0.996	1.00924	0.0190	0.6274		2b
rs28374431	4:170640154	A/T	CLCN3	intron	0.989	0.97161	0.0160	0.07111		6
rs28404050	4:170608035	A/G	CLCN3	intron	0.992	0.98610	0.0190	0.4599		6
rs28420472	4:170608033	T/C	CLCN3	intron	0.992	0.98610	0.0190	0.4599		6
rs28670063	4:170551373	T/C	CLCN3	intron	0.995	1.05866	0.0106	8.608E-8		5
rs28704165	4:170640993	T/C	CLCN3	intron	0.988	0.97219	0.0160	0.07769		7
rs28716464	4:170576069	T/G	CLCN3	intron	0.996	0.98857	0.0189	0.5435		6
rs28722107	4:170558896	A/G	CLCN3	intron	0.990	0.94847	0.0126	0.00002853		7
rs33965812	4:170601172	A/G	CLCN3	intron	0.996	0.94677	0.0125	0.00001194		7
rs34165464	4:170545775	A/G	CLCN3	intron	0.978	1.00310	0.0305	0.919		7
rs34245020	4:170607716	T/C	CLCN3	intron	0.992	1.05654	0.0125	0.00001133		7
rs34436258	4:170594046	T/C	CLCN3	intron	0.989	1.05570	0.0126	0.00001733		6
rs34576933	4:170577639	A/G	CLCN3	intron	0.971	0.92811	0.0539	0.1662		5
rs34607126	4:170595804	A/T	CLCN3	intron	0.995	0.94705	0.0125	0.0000145		6
rs34693969	4:170599431	A/C	CLCN3	intron	0.994	1.05559	0.0125	0.00001608		7
rs34703692	4:170609564	A/T	CLCN3	intron	0.980	0.92044	0.0530	0.1179		6
rs34755939	4:170584703	C/G	CLCN3	intron	0.995	0.94649	0.0125	0.00001038		7
rs34763720	4:170606122	C/G	CLCN3	intron	0.989	1.05475	0.0126	0.00002265		6
rs34838831	4:170553559	T/C	CLCN3	intron	0.998	1.05749	0.0125	8.105E-6		5
rs35078786	4:170600805	T/C	CLCN3	intron	0.994	1.05559	0.0125	0.00001626		6
rs35136788	4:170615851	A/G	CLCN3	intron	0.985	1.05264	0.0126	0.00004651		7
rs35280277	4:170585506	A/G	CLCN3	intron	0.994	0.94592	0.0125	8.475E-6		6
rs35582249	4:170585173	A/G	CLCN3	intron	0.995	0.94649	0.0125	0.0000104		4
rs35590796	4:170543486	T/C	CLCN3	intron	0.974	0.99402	0.0308	0.8447		2b
rs35621562	4:170584603	T/C	CLCN3	intron	0.849	1.03832	0.0358	0.2943		7
rs35695165	4:170630795	A/T	CLCN3	intron	0.985	0.94971	0.0122	0.0000222		7
rs35899341	4:170586793	A/G	CLCN3	intron	0.993	0.94488	0.0125	5.628E-6		4
rs35951896	4:170621232	T/C	CLCN3	intron	0.988	1.05369	0.0121	0.00001684		6
rs35981888	4:170624780	A/G	CLCN3	intron	0.979	0.91989	0.0531	0.1156		5
rs3797040	4:170540857	T/C	CLCN3	near-gene-5	0.984	0.94308	0.0107	4.35E-8		4
rs3797041	4:170541041	T/C	CLCN3	near-gene-5	0.995	0.96503	0.0218	0.1023		2b
rs3923997	4:170601955	T/C	CLCN3	intron	0.995	1.01147	0.0190	0.5481		7
rs4434205	4:170546431	T/C	CLCN3	intron	0.992	1.05770	0.0107	1.391E-7		7
rs4692571	4:170544083	T/C	CLCN3	intron	0.990	1.05285	0.0127	0.00005336		5
rs4692572	4:170544312	T/C	CLCN3	intron	0.988	0.96812	0.0214	0.1296		7
rs4692574	4:170560331	T/C	CLCN3	intron	0.995	0.94327	0.0106	4.081E-8		7
rs4692735	4:170552632	T/G	CLCN3	intron	0.995	0.94403	0.0106	6.028E-8		7
rs4692740	4:170606028	A/G	CLCN3	intron	0.994	1.05993	0.0106	4.601E-8		5
rs58157393	4:170633222	A/C	CLCN3	intron	0.987	0.94478	0.0107	1.032E-7		7
rs62333164	4:170583157	A/G	CLCN3	intron	0.996	1.05138	0.0114	0.00001087		5
rs62333166	4:170584880	A/G	CLCN3	intron	0.998	1.02491	0.0157	0.1157		5
rs62333170	4:170587248	A/G	CLCN3	intron	0.996	1.05717	0.0125	8.421E-6		7
rs62333171	4:170593582	T/C	CLCN3	intron	0.992	1.05696	0.0125	0.0000102		6
rs62333172	4:170594892	A/G	CLCN3	intron	1.000	0.97687	0.0156	0.1329		6
rs62333177	4:170601029	A/G	CLCN3	intron	0.920	1.02870	0.0175	0.1053		7
rs62334531	4:170551360	T/G	CLCN3	intron	0.997	0.97951	0.0155	0.182		5
rs62334533	4:170566308	A/C	CLCN3	intron	0.994	1.05665	0.0126	0.00001141		7
rs62334535	4:170569438	A/G	CLCN3	intron	1.000	1.02470	0.0156	0.1177		7
rs62346178	4:170620812	A/G	CLCN3	intron	0.992	0.97521	0.0161	0.1188		7
rs62346179	4:170621045	T/G	CLCN3	intron	0.968	0.97385	0.0158	0.0936		6
rs62346181	4:170624330	T/C	CLCN3	intron	0.989	0.94942	0.0121	0.00001901		5
rs62346182	4:170627119	C/G	CLCN3	intron	0.842	0.95523	0.0197	0.02014		7
rs62346184	4:170633035	T/C	CLCN3	intron	0.978	1.05117	0.0123	0.00004713		6
rs62346188	4:170636463	T/C	CLCN3	intron	0.820	1.04854	0.0469	0.3119		6
rs6823311	4:170615333	A/G	CLCN3	intron	0.994	1.06024	0.0106	3.815E-8		6
rs6828248	4:170562784	A/T	CLCN3	intron	0.996	1.05390	0.0113	3.336E-6		7
rs6828910	4:170563126	A/G	CLCN3	intron	0.995	1.05961	0.0106	5.355E-8		6
rs6834147	4:170563153	T/C	CLCN3	intron	0.993	1.01704	0.0177	0.3411		7
rs6839362	4:170569481	A/T	CLCN3	intron	1.000	1.05749	0.0116	1.364E-6		7
rs6842802	4:170640421	T/G	CLCN3	intron	0.980	0.94450	0.0107	9.877E-8		7
rs6845698	4:170562093	C/G	CLCN3	intron	0.601	0.97599	0.0508	0.6333		6
rs6852201	4:170615503	T/C	CLCN3	intron	0.993	0.94280	0.0106	3.122E-8		7
rs6857404	4:170569172	T/C	CLCN3	intron	1.000	0.94715	0.0116	2.835E-6		7
rs71622352	4:170599571	A/T	CLCN3	intron	0.825	1.02963	0.0357	0.4145		6
rs72694729	4:170547295	A/G	CLCN3	intron	0.992	1.03045	0.0218	0.1685		4
rs72694732	4:170549860	A/G	CLCN3	intron	0.996	0.97171	0.0217	0.1863		5
rs72694741	4:170555121	T/C	CLCN3	intron	0.973	0.97375	0.0219	0.2245		6
rs72694742	4:170557709	T/G	CLCN3	intron	0.991	1.02984	0.0217	0.1754		7
rs72694745	4:170558052	T/C	CLCN3	intron	0.996	0.97093	0.0217	0.1744		7
rs72694747	4:170558716	A/G	CLCN3	intron	0.993	1.03066	0.0215	0.1602		7
rs72694754	4:170564697	A/T	CLCN3	intron	0.973	0.97609	0.0213	0.2557		6
rs72694755	4:170566021	A/G	CLCN3	intron	0.997	1.02840	0.0217	0.1959		5
rs72694764	4:170574928	A/G	CLCN3	intron	0.992	1.02860	0.0217	0.1939		7
rs72694767	4:170576774	T/C	CLCN3	intron	0.996	0.99064	0.0190	0.6213		7
rs72694777	4:170582644	A/G	CLCN3	intron	0.996	0.99035	0.0190	0.6111		6
rs72694785	4:170593017	T/G	CLCN3	intron	0.997	1.01035	0.0190	0.5891		7
rs72694790	4:170595413	A/G	CLCN3	intron	0.997	1.02163	0.0230	0.3532		6
rs72694795	4:170601823	T/C	CLCN3	intron	0.995	1.01147	0.0190	0.5487		5
rs72694798	4:170602857	A/T	CLCN3	intron	0.995	1.01106	0.0190	0.5648		6
rs72696626	4:170616465	T/C	CLCN3	intron	0.994	0.94299	0.0106	3.42E-8		7
rs72696630	4:170617777	A/G	CLCN3	intron	0.965	0.98738	0.0190	0.5046		7
rs72696645	4:170630705	A/G	CLCN3	intron	0.988	1.01319	0.0191	0.4915		6
rs72696649	4:170633020	A/T	CLCN3	intron	0.980	1.04781	0.0113	0.00003681		6
rs72696653	4:170635590	A/G	CLCN3	intron	0.963	1.01521	0.0191	0.4312		7
rs72696657	4:170638466	T/C	CLCN3	intron	0.982	0.94148	0.0107	1.785E-8		7
rs73864758	4:170627045	A/G	CLCN3	intron	0.700	1.05517	0.0388	0.1662		6
rs75119568	4:170595803	A/G	CLCN3	intron	1.000	0.97687	0.0156	0.1331		6
rs76179196	4:170600227	A/C	CLCN3	intron	0.884	1.09417	0.0483	0.06257		7
rs7667711	4:170612238	A/G	CLCN3	intron	0.999	1.02398	0.0156	0.1301		6
rs7681537	4:170546509	A/G	CLCN3	intron	0.988	0.94611	0.0107	2.164E-7		7
rs7682861	4:170549443	A/G	CLCN3	intron	0.996	1.02757	0.0215	0.2065		7
rs77659893	4:170605788	T/C	CLCN3	intron	0.975	1.01025	0.0324	0.7522		7
rs77661390	4:170619885	T/C	CLCN3	intron	0.615	0.99880	0.0489	0.9812		5
rs78022702	4:170625819	A/T	CLCN3	intron	0.747	0.96454	0.0462	0.4347		6
rs78250844	4:170635318	T/C	CLCN3	intron	0.698	1.05823	0.0389	0.1463		7
rs78422846	4:170606826	T/C	CLCN3	intron	0.974	0.98965	0.0330	0.7528		5
rs78525012	4:170603442	A/G	CLCN3	intron	0.791	0.94838	0.0312	0.09004		5
rs78757016	4:170626300	T/G	CLCN3	intron	0.970	0.99402	0.0325	0.853		6
rs78905394	4:170619570	T/C	CLCN3	intron	0.654	0.98314	0.0364	0.64		5
rs79297870	4:170557550	A/T	CLCN3	intron	0.760	0.95523	0.0263	0.08147		5
rs9637705	4:170567546	A/T	CLCN3	intron	1.000	1.02491	0.0156	0.1145		7
rs9761582	4:170589674	T/C	CLCN3	intron	0.977	1.07369	0.0525	0.176		4
rs9993016	4:170596122	A/C	CLCN3	intron	0.976	0.92709	0.0515	0.1421		7
rs9996636	4:170628524	A/G	CLCN3	intron	0.992	0.94469	0.0107	9.041E-8		6
rs9996873	4:170556846	T/G	CLCN3	intron	0.991	0.97006	0.0131	0.02059		7
rs9998446	4:170594328	A/G	CLCN3	intron	0.830	1.09461	0.0486	0.06283		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information