CTNNA1

Basic Information

Gene Symbol	CTNNA1
Entrez Id	1495
Position	chr5:138089107..138270723
Description	catenin (cadherin-associated protein), alpha 1, 102kDa
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10038162	5:138236755	A/G	CTNNA1	intron	1.000	0.99860	0.0116	0.9016		6
rs10043478	5:138188711	C/G	CTNNA1	intron	1.000	1.00130	0.0116	0.9099		1f
rs10043722	5:138236941	A/G	CTNNA1	intron	0.963	0.98896	0.0110	0.3133		7
rs10044401	5:138237557	A/G	CTNNA1	intron	1.000	0.99890	0.0117	0.9238		5
rs10054682	5:138259443	T/C	CTNNA1	intron	1.000	1.00160	0.0117	0.889		5
rs10056014	5:138256018	A/T	CTNNA1	intron	1.000	1.00180	0.0117	0.877		6
rs10056160	5:138147518	A/G	CTNNA1	intron	0.998	1.00110	0.0117	0.9242		7
rs10062552	5:138238043	A/G	CTNNA1	intron	0.997	0.99810	0.0116	0.8721		6
rs10067361	5:138240874	T/G	CTNNA1	intron	1.000	1.00120	0.0117	0.9188		7
rs10068280	5:138267083	T/C	CTNNA1	intron	0.999	0.99481	0.0117	0.6575		7
rs10076629	5:138255961	C/G	CTNNA1	intron	1.000	1.00150	0.0117	0.8977		7
rs10078079	5:138256139	T/C	CTNNA1	intron	1.000	1.00070	0.0117	0.955		7
rs10078179	5:138256099	C/G	CTNNA1	intron	1.000	1.00180	0.0117	0.8774		6
rs10080193	5:138264424	A/G	CTNNA1	intron	1.000	0.99920	0.0117	0.9478		7
rs10155636	5:138261990	A/G	CTNNA1	intron	1.000	0.99840	0.0117	0.8915		5
rs1039788	5:138171501	A/G	CTNNA1	intron	1.000	1.00160	0.0116	0.8934		7
rs1039789	5:138171423	T/C	CTNNA1	intron	1.000	0.99840	0.0116	0.8883		7
rs10463974	5:138253671	A/G	CTNNA1	intron	0.715	1.04425	0.0365	0.2352		7
rs10463975	5:138263249	A/G	CTNNA1	intron	1.000	1.00080	0.0117	0.9475		3a
rs10515503	5:138218178	A/G	CTNNA1	intron	0.871	1.00080	0.0211	0.9698		7
rs10515504	5:138222994	C/G	CTNNA1	intron	0.999	1.00140	0.0116	0.9031		6
rs1095374	5:138095206	A/G	CTNNA1	intron	0.996	1.00030	0.0116	0.9791		6
rs114618296	5:138102175	A/G	CTNNA1	intron	0.734	1.00220	0.0495	0.9648		5
rs114818254	5:138240394	A/G	CTNNA1	intron	0.747	1.02634	0.0465	0.5758		7
rs114875370	5:138249581	T/C	CTNNA1	intron	0.680	0.95266	0.0516	0.3473		7
rs114901155	5:138199901	A/G	CTNNA1	intron	0.857	1.00421	0.0215	0.8442		7
rs115438318	5:138161779	T/G	CTNNA1	intron	0.772	1.02102	0.0343	0.5432		7
rs115701528	5:138152349	T/C	CTNNA1	intron	0.948	0.96310	0.0214	0.07964		5
rs116150757	5:138143774	T/C	CTNNA1	intron	0.836	1.02450	0.0568	0.6698		6
rs116628070	5:138094836	T/G	CTNNA1	intron	0.718	1.01857	0.0371	0.6195		6
rs11739389	5:138128687	A/G	CTNNA1	intron	0.611	0.94261	0.0530	0.2643		7
rs11953339	5:138259542	A/T	CTNNA1	intron	1.000	1.00150	0.0117	0.8961		7
rs11954103	5:138269148	A/G	CTNNA1	intron	0.998	1.00391	0.0118	0.7404		5
rs11958642	5:138240707	T/C	CTNNA1	intron	0.989	0.99880	0.0117	0.9171		7
rs12186373	5:138248574	A/T	CTNNA1	intron	0.998	1.00170	0.0117	0.8849		6
rs12188426	5:138111712	A/G	CTNNA1	intron	0.734	0.99780	0.0495	0.964		6
rs12188779	5:138169099	T/C	CTNNA1	intron	0.870	1.00652	0.0571	0.9088		5
rs12332276	5:138113408	A/G	CTNNA1	intron	0.871	1.00020	0.0118	0.9841		6
rs12517514	5:138150119	A/G	CTNNA1	intron	0.997	0.99890	0.0116	0.9258		7
rs12653845	5:138091697	T/G	CTNNA1	intron	0.777	0.99651	0.0253	0.8893		7
rs12656942	5:138176458	A/G	CTNNA1	intron	1.000	1.00160	0.0116	0.8932		6
rs12719515	5:138241318	A/G	CTNNA1	intron	1.000	1.00160	0.0116	0.8926		5
rs13154573	5:138148064	T/C	CTNNA1	intron	0.989	0.99960	0.0120	0.9712		7
rs13158360	5:138258177	A/G	CTNNA1	intron	0.999	1.00331	0.0116	0.7789		7
rs13162420	5:138174759	T/C	CTNNA1	intron	0.992	0.99631	0.0120	0.7587		7
rs13167462	5:138177261	A/G	CTNNA1	intron	0.991	1.00401	0.0120	0.7401		7
rs13167905	5:138203449	T/C	CTNNA1	intron	0.646	0.97336	0.0192	0.1598		6
rs13172507	5:138243098	A/G	CTNNA1	intron	1.000	0.99790	0.0116	0.8529		7
rs13173221	5:138243819	A/T	CTNNA1	intron	1.000	0.99850	0.0117	0.8984		7
rs13173618	5:138139780	T/G	CTNNA1	intron	0.991	0.99930	0.0120	0.9537		5
rs13174008	5:138257909	T/C	CTNNA1	intron	0.999	0.99651	0.0116	0.7613		7
rs13177415	5:138249940	A/C	CTNNA1	intron	1.000	1.00110	0.0117	0.926		6
rs13178601	5:138267377	A/G	CTNNA1	intron	1.000	1.00391	0.0117	0.7425		6
rs13181762	5:138250106	A/G	CTNNA1	intron	1.000	1.00130	0.0117	0.909		7
rs13188082	5:138251689	A/G	CTNNA1	intron	1.000	1.00150	0.0117	0.8998		7
rs138378475	5:138233642	C/G	CTNNA1	intron	0.654	0.91074	0.0653	0.152		-
rs138617671	5:138142906	A/T	CTNNA1	intron	0.752	1.00531	0.0382	0.8895		-
rs141375123	5:138244722	A/C	CTNNA1	intron	0.890	0.99541	0.0599	0.9391		-
rs141655682	5:138142907	C/G	CTNNA1	intron	0.752	0.99471	0.0382	0.8894		-
rs142909966	5:138099198	A/G	CTNNA1	intron	0.699	0.99283	0.0669	0.9145		-
rs147705041	5:138101098	T/C	CTNNA1	intron	0.665	1.05201	0.0316	0.1084		-
rs147893425	5:138136446	T/C	CTNNA1	intron	0.938	1.04123	0.0216	0.06144		-
rs148665639	5:138108249	A/G	CTNNA1	intron	0.706	0.94990	0.0636	0.4193		-
rs148685986	5:138178705	T/C	CTNNA1	intron	0.711	1.03728	0.0553	0.5074		-
rs148972326	5:138252650	A/T	CTNNA1	intron	0.868	1.00331	0.0212	0.8752		-
rs150857930	5:138192439	A/G	CTNNA1	intron	0.663	0.94139	0.0563	0.2826		-
rs150893072	5:138160248	C/G	CTNNA1	missense	0.701	1.00150	0.0670	0.9825		-
rs1567313	5:138110702	A/G	CTNNA1	intron	0.997	0.99810	0.0116	0.868		2b
rs17207681	5:138168527	A/G	CTNNA1	intron	0.971	0.97716	0.0173	0.1812		7
rs17207772	5:138241820	C/G	CTNNA1	intron	1.000	1.00190	0.0116	0.8682		7
rs1725351	5:138101586	T/C	CTNNA1	intron	0.991	1.00060	0.0120	0.9617		6
rs17286207	5:138160898	A/G	CTNNA1	intron	0.775	1.06833	0.0236	0.005091		4
rs17286305	5:138238543	A/G	CTNNA1	intron	0.952	0.97677	0.0174	0.1781		7
rs176381	5:138196731	T/C	CTNNA1	intron	1.000	1.00220	0.0116	0.8474		7
rs176382	5:138226767	T/C	CTNNA1	intron	1.000	1.00140	0.0116	0.9029		6
rs180794521	5:138159466	A/G	CTNNA1	intron	0.731	0.97453	0.0610	0.6721		-
rs180911539	5:138249258	A/G	CTNNA1	intron	0.679	0.92422	0.0671	0.2401		-
rs181534670	5:138238319	A/G	CTNNA1	intron	0.625	0.98098	0.0596	0.748		-
rs183606767	5:138150738	A/G	CTNNA1	intron	0.635	0.89404	0.0725	0.1223		-
rs185660178	5:138213295	T/C	CTNNA1	intron	0.720	0.95437	0.0286	0.1026		-
rs188565749	5:138147166	T/C	CTNNA1	intron	0.619	1.01888	0.0183	0.3067		-
rs189356122	5:138111451	A/G	CTNNA1	intron	0.688	0.90448	0.0440	0.02249		-
rs190608381	5:138240717	A/G	CTNNA1	intron	0.745	1.01918	0.0579	0.7422		-
rs191663395	5:138095769	T/C	CTNNA1	intron	0.613	1.04770	0.0679	0.4928		-
rs1972072	5:138185293	C/G	CTNNA1	intron	1.000	0.99830	0.0116	0.8814		2b
rs1976561	5:138110540	T/C	CTNNA1	intron	0.989	1.00150	0.0116	0.8944		7
rs1976562	5:138110594	A/G	CTNNA1	intron	0.981	0.99980	0.0117	0.9864		7
rs1976568	5:138180316	T/G	CTNNA1	intron	1.000	1.00180	0.0116	0.8798		6
rs2174972	5:138101918	C/G	CTNNA1	intron	0.999	0.99900	0.0116	0.9306		5
rs2292268	5:138204481	A/G	CTNNA1	intron	0.773	1.03448	0.0227	0.1353		7
rs2351247	5:138185145	A/G	CTNNA1	intron	1.000	1.00060	0.0117	0.958		3a
rs2351463	5:138258802	A/C	CTNNA1	intron	0.999	0.99700	0.0116	0.7991		7
rs2662543	5:138234130	T/G	CTNNA1	intron	0.994	0.99730	0.0116	0.8151		4
rs2693962	5:138106384	T/G	CTNNA1	intron	0.998	1.00100	0.0117	0.9332		6
rs2693963	5:138106326	T/G	CTNNA1	intron	0.999	0.99890	0.0116	0.9212		7
rs28363456	5:138238807	T/C	CTNNA1	intron	0.749	0.96117	0.0322	0.2193		5
rs28363467	5:138254145	A/G	CTNNA1	intron	0.764	1.13315	0.0513	0.01488		6
rs28363476	5:138262215	A/G	CTNNA1	intron	0.788	1.06503	0.0259	0.01489		7
rs28745577	5:138200565	A/G	CTNNA1	intron	0.735	1.06109	0.0461	0.1979		6
rs288009	5:138228662	A/G	CTNNA1	intron	1.000	1.00110	0.0117	0.9284		7
rs288012	5:138196273	T/C	CTNNA1	intron	1.000	1.00000	0.0115	0.9988		7
rs288014	5:138195793	A/G	CTNNA1	intron	0.999	0.99910	0.0116	0.936		6
rs288015	5:138195217	T/C	CTNNA1	intron	1.000	0.99820	0.0116	0.8733		6
rs288021	5:138224283	T/C	CTNNA1	intron	0.996	1.00020	0.0118	0.988		5
rs288027	5:138222330	A/G	CTNNA1	intron	0.863	0.97981	0.0167	0.2208		6
rs288029	5:138217305	T/C	CTNNA1	intron	1.000	1.00020	0.0117	0.9889		5
rs288033	5:138214094	T/C	CTNNA1	intron	1.000	1.00230	0.0116	0.8416		6
rs288042	5:138203034	T/G	CTNNA1	intron	1.000	1.00190	0.0116	0.8696		7
rs2940594	5:138100998	A/G	CTNNA1	intron	0.953	1.00160	0.0116	0.8884		7
rs2940595	5:138101037	A/G	CTNNA1	intron	0.999	0.99900	0.0116	0.9291		6
rs34052623	5:138120113	A/C	CTNNA1	intron	0.845	1.01867	0.0287	0.518		5
rs34645817	5:138152633	A/G	CTNNA1	intron	0.976	1.00170	0.0117	0.8864		6
rs35605729	5:138120775	A/G	CTNNA1	intron	0.845	0.98167	0.0287	0.5191		7
rs3789151	5:138145460	T/C	CTNNA1	intron	0.998	1.00120	0.0116	0.9173		5
rs3804199	5:138162129	T/C	CTNNA1	intron	1.000	0.99900	0.0116	0.9279		7
rs423469	5:138234116	C/G	CTNNA1	intron	1.000	0.99990	0.0115	0.9945		5
rs430654	5:138200566	T/C	CTNNA1	intron	0.997	1.00140	0.0116	0.9064		6
rs4835649	5:138146223	T/C	CTNNA1	intron	0.998	0.99890	0.0116	0.9219		5
rs4835702	5:138150657	A/G	CTNNA1	intron	0.982	0.99601	0.0116	0.7302		7
rs4835703	5:138150737	T/G	CTNNA1	intron	0.997	0.99990	0.0118	0.9918		6
rs4835704	5:138151325	A/G	CTNNA1	intron	0.997	0.99910	0.0117	0.9409		5
rs4835705	5:138163576	T/C	CTNNA1	intron	0.999	0.99850	0.0116	0.8937		6
rs4835706	5:138164726	A/G	CTNNA1	intron	0.999	1.00150	0.0116	0.8986		7
rs4835707	5:138174520	A/G	CTNNA1	intron	1.000	1.00160	0.0116	0.8932		7
rs4835708	5:138179893	T/C	CTNNA1	intron	0.997	1.00120	0.0116	0.9196		4
rs495638	5:138200942	T/C	CTNNA1	intron	1.000	1.00200	0.0116	0.8632		5
rs62381196	5:138176689	T/C	CTNNA1	intron	1.000	1.00160	0.0116	0.8931		7
rs62381198	5:138179171	T/C	CTNNA1	intron	0.846	1.01898	0.0409	0.6462		5
rs62381203	5:138244268	T/C	CTNNA1	intron	0.946	1.00050	0.0119	0.9694		7
rs62381204	5:138249576	T/G	CTNNA1	intron	0.952	1.02316	0.0174	0.1891		7
rs62381205	5:138250924	T/C	CTNNA1	intron	0.962	1.02593	0.0177	0.1478		6
rs62384262	5:138089086	A/G	CTNNA1	near-gene-5,untranslated-5	0.757	0.99054	0.0122	0.4341		2b
rs62384263	5:138089748	A/C	CTNNA1	intron,untranslated-5	0.780	0.98946	0.0453	0.8143		4
rs62384264	5:138097169	A/G	CTNNA1	intron	0.687	1.06887	0.0605	0.2712		4
rs62384265	5:138097175	T/C	CTNNA1	intron	0.808	1.03241	0.0171	0.06166		5
rs62384266	5:138100042	T/C	CTNNA1	intron	0.978	1.00000	0.0116	0.9989		6
rs62384267	5:138108703	T/C	CTNNA1	intron	0.904	0.96986	0.0179	0.08757		6
rs6421921	5:138167270	T/G	CTNNA1	intron	1.000	0.99860	0.0116	0.9042		7
rs6596449	5:138146414	A/G	CTNNA1	intron	0.969	0.99810	0.0116	0.867		6
rs6596450	5:138146520	A/G	CTNNA1	intron	0.916	1.00582	0.0117	0.6185		5
rs6596453	5:138151891	T/G	CTNNA1	intron	0.997	1.00090	0.0117	0.9396		5
rs6596454	5:138165651	A/C	CTNNA1	intron	0.998	1.00100	0.0117	0.93		7
rs6596455	5:138167105	T/C	CTNNA1	intron	0.999	1.00100	0.0117	0.9288		7
rs6596456	5:138167497	A/G	CTNNA1	intron	1.000	1.00090	0.0115	0.9398		4
rs67339770	5:138243266	A/G	CTNNA1	intron	0.844	1.00944	0.0237	0.6904		5
rs6859193	5:138265897	A/G	CTNNA1	intron	0.660	1.09922	0.0664	0.1544		6
rs6860780	5:138160056	A/G	CTNNA1	intron	0.997	0.99850	0.0116	0.8964		7
rs6861556	5:138188040	T/C	CTNNA1	intron	1.000	0.99940	0.0117	0.9623		6
rs6863054	5:138188855	T/C	CTNNA1	intron	0.999	1.00160	0.0116	0.8891		7
rs6866199	5:138106497	T/C	CTNNA1	intron	0.987	1.00040	0.0116	0.9698		7
rs6866334	5:138106436	T/G	CTNNA1	intron	0.885	1.00120	0.0118	0.9207		7
rs6872423	5:138246778	T/C	CTNNA1	intron	1.000	0.99870	0.0117	0.9103		6
rs6873425	5:138155245	A/G	CTNNA1	intron	0.999	1.00130	0.0116	0.908		5
rs6874181	5:138190786	A/G	CTNNA1	intron	0.961	0.99750	0.0116	0.8282		7
rs6877187	5:138159344	T/C	CTNNA1	intron	0.999	0.99890	0.0116	0.9228		6
rs6880786	5:138181563	A/G	CTNNA1	intron	1.000	0.99830	0.0116	0.8806		7
rs6884198	5:138164307	T/C	CTNNA1	intron	0.999	1.00130	0.0116	0.9103		7
rs6887841	5:138175910	A/G	CTNNA1	intron	1.000	1.00160	0.0116	0.8884		7
rs6890932	5:138246328	A/G	CTNNA1	intron	1.000	1.00150	0.0117	0.8972		5
rs700620	5:138097936	T/C	CTNNA1	intron	1.000	1.00050	0.0116	0.9644		5
rs700622	5:138098551	T/C	CTNNA1	intron	0.998	1.00120	0.0117	0.9165		7
rs700623	5:138098682	A/G	CTNNA1	intron	0.999	1.00120	0.0115	0.9186		6
rs700625	5:138099597	A/T	CTNNA1	intron	0.998	0.99900	0.0116	0.9326		6
rs700626	5:138117938	A/G	CTNNA1	intron	0.998	0.99760	0.0116	0.8358		7
rs700627	5:138119400	A/T	CTNNA1	intron	0.998	0.99860	0.0116	0.9062		7
rs700628	5:138123264	A/C	CTNNA1	intron	0.867	1.00411	0.0571	0.9431		7
rs700629	5:138123994	T/G	CTNNA1	intron	0.998	1.00070	0.0115	0.9508		6
rs72788842	5:138144676	A/T	CTNNA1	intron	0.648	1.09090	0.0532	0.1018		6
rs72788880	5:138257870	A/T	CTNNA1	intron	0.637	1.07595	0.0569	0.1977		6
rs73265428	5:138263623	A/G	CTNNA1	intron	0.753	1.04039	0.0316	0.2101		4
rs74981057	5:138171216	A/G	CTNNA1	intron	0.818	0.96918	0.0554	0.5725		7
rs75029634	5:138251819	A/G	CTNNA1	intron	0.749	1.04949	0.0358	0.1766		6
rs75477538	5:138243654	T/C	CTNNA1	intron	0.625	0.95018	0.0444	0.2504		7
rs76171263	5:138120354	C/G	CTNNA1	intron	0.620	1.04362	0.0312	0.1712		5
rs76575791	5:138148618	C/G	CTNNA1	intron	0.603	0.97795	0.0402	0.5784		7
rs76655226	5:138202716	A/T	CTNNA1	intron	0.790	0.96580	0.0193	0.07039		6
rs76786411	5:138185626	T/C	CTNNA1	intron	0.604	0.95858	0.0412	0.3049		5
rs76835151	5:138122328	C/G	CTNNA1	intron	0.693	0.90946	0.0418	0.02298		5
rs77069528	5:138198062	T/C	CTNNA1	intron	0.798	1.01918	0.0311	0.5407		7
rs7710288	5:138179738	A/G	CTNNA1	intron	1.000	0.99820	0.0116	0.8752		2b
rs7736925	5:138154530	C/G	CTNNA1	intron	0.998	1.00100	0.0117	0.9295		6
rs77547318	5:138124126	T/C	CTNNA1	intron	0.709	1.05802	0.0453	0.2129		7
rs77626370	5:138159155	T/C	CTNNA1	intron	0.619	0.96117	0.0524	0.4496		7
rs77676336	5:138096816	A/G	CTNNA1	intron	0.777	0.98590	0.0308	0.6464		5
rs77683255	5:138245019	A/T	CTNNA1	intron	0.760	1.04886	0.0652	0.4645		6
rs77864290	5:138140273	A/G	CTNNA1	intron	0.698	1.10197	0.0428	0.02324		6
rs78954934	5:138218060	A/G	CTNNA1	intron	0.761	1.05222	0.0653	0.4363		6
rs79003713	5:138135234	A/G	CTNNA1	intron	0.939	1.04112	0.0216	0.06197		6
rs79410036	5:138114233	T/C	CTNNA1	intron	0.664	1.02973	0.0325	0.3681		5
rs80183771	5:138193177	A/T	CTNNA1	intron	0.613	0.98600	0.0342	0.6815		6
rs80339540	5:138114026	C/G	CTNNA1	intron	0.732	1.01440	0.0537	0.7906		6
rs825672	5:138095643	T/C	CTNNA1	intron	0.976	1.00100	0.0117	0.9345		6
rs825675	5:138102972	A/G	CTNNA1	intron	0.996	1.00110	0.0117	0.9237		5
rs825676	5:138104011	C/G	CTNNA1	intron	0.789	1.00280	0.0265	0.9153		5
rs825677	5:138104770	T/C	CTNNA1	intron	0.997	1.00130	0.0117	0.9108		7
rs825746	5:138136619	T/C	CTNNA1	intron	0.998	1.00110	0.0116	0.9239		7
rs825747	5:138136585	A/G	CTNNA1	intron	0.997	0.99950	0.0117	0.9649		6
rs825748	5:138136067	A/G	CTNNA1	intron	0.998	0.99890	0.0116	0.9231		7
rs825749	5:138135921	A/C	CTNNA1	intron	0.998	0.99930	0.0115	0.9523		6
rs825750	5:138135124	T/C	CTNNA1	intron	0.999	1.00100	0.0116	0.9325		6
rs825751	5:138133869	A/G	CTNNA1	intron	0.984	0.99790	0.0116	0.8543		7
rs825754	5:138131889	A/G	CTNNA1	intron	0.998	0.99910	0.0116	0.9378		6
rs825758	5:138126977	A/G	CTNNA1	intron	0.998	1.00110	0.0116	0.9266		6
rs825759	5:138125939	A/G	CTNNA1	intron	0.996	0.99870	0.0118	0.9112		4
rs825760	5:138139974	T/G	CTNNA1	intron	0.959	1.00080	0.0118	0.9481		5
rs825761	5:138138007	A/G	CTNNA1	intron	0.993	0.99651	0.0116	0.7607		7
rs825762	5:138137670	T/C	CTNNA1	intron	0.998	0.99880	0.0116	0.9186		6
rs825763	5:138121335	T/C	CTNNA1	intron	0.998	1.00070	0.0116	0.952		7
rs825764	5:138121038	T/C	CTNNA1	intron	0.951	1.00020	0.0118	0.9872		7
rs825768	5:138116035	C/G	CTNNA1	intron	0.995	1.00010	0.0115	0.9954		6
rs825769	5:138115355	A/G	CTNNA1	intron	0.998	1.00160	0.0116	0.8871		6
rs825770	5:138115219	T/G	CTNNA1	intron	0.989	0.99800	0.0116	0.8641		7
rs851278	5:138103266	A/G	CTNNA1	intron	0.999	0.99860	0.0116	0.9044		5
rs883333	5:138155470	A/C	CTNNA1	intron	0.998	0.99900	0.0117	0.93		6
rs884469	5:138155959	C/G	CTNNA1	intron	0.999	0.99930	0.0115	0.9541		7
rs884470	5:138155925	A/G	CTNNA1	intron	0.999	0.99860	0.0116	0.9023		6
rs891996	5:138267816	A/G	CTNNA1	intron	0.999	0.99740	0.0116	0.8207		5
rs906695	5:138139277	T/C	CTNNA1	intron	0.997	1.00080	0.0116	0.9481		6
rs9327826	5:138182007	A/G	CTNNA1	intron	1.000	0.99830	0.0116	0.8806		7
rs9327827	5:138182328	T/C	CTNNA1	intron	1.000	1.00210	0.0116	0.8575		6
rs9327828	5:138261548	T/G	CTNNA1	intron	1.000	0.99840	0.0117	0.8925		3a
rs9327829	5:138261671	T/C	CTNNA1	intron	1.000	1.00090	0.0117	0.9421		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information