CYP1A2

Basic Information

Gene Symbol	CYP1A2
Entrez Id	1544
Position	chr15:75041184..75048941
Description	cytochrome P450, family 1, subfamily A, polypeptide 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs12593808	15:75046677	T/G	CYP1A2	intron	0.973	1.00080	0.0222	0.9708		6
rs140904510	15:75040504	A/G	CYP1A2	near-gene-5	0.645	1.01806	0.0563	0.75		-
rs2069522	15:75039233	T/C	CYP1A2	near-gene-5	0.993	0.98659	0.0329	0.6816		1f
rs2069524	15:75040276	A/G	CYP1A2	near-gene-5	0.991	0.98649	0.0336	0.6859		7
rs2069525	15:75040372	T/C	CYP1A2	near-gene-5	0.991	0.98079	0.0331	0.558		6
rs2069526	15:75041341	T/G	CYP1A2	intron	0.991	0.97932	0.0331	0.5269		1f
rs2470890	15:75047426	T/C	CYP1A2	coding-synon	0.991	0.97239	0.0112	0.01228		6
rs2472304	15:75044238	A/G	CYP1A2	intron	1.000	0.97317	0.0111	0.01455		5
rs28399423	15:75047089	T/C	CYP1A2	intron	0.691	1.03210	0.0453	0.4857		5
rs4646425	15:75043281	T/C	CYP1A2	intron	0.992	1.01197	0.0337	0.7252		4
rs4646427	15:75045692	T/C	CYP1A2	intron	0.992	0.98600	0.0337	0.6758		6
rs58661304	15:75047699	A/C	CYP1A2	untranslated-3	0.650	1.05285	0.0355	0.1472		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information