CYP26B1

Basic Information

Gene Symbol	CYP26B1
Entrez Id	56603
Position	chr2:72356367..72374963
Description	cytochrome P450, family 26, subfamily B, polypeptide 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10166057	2:72369876	T/C	CYP26B1	intron	0.928	1.09122	0.0205	0.00002096		5
rs10181341	2:72358275	A/G	CYP26B1	untranslated-3	0.930	0.92561	0.0211	0.0002423		4
rs10190766	2:72366818	T/C	CYP26B1	intron	0.868	0.90756	0.0342	0.004521		5
rs10193621	2:72367178	C/G	CYP26B1	intron	0.879	0.91174	0.0335	0.005796		5
rs10197528	2:72368687	C/G	CYP26B1	intron	0.865	0.90828	0.0347	0.00554		5
rs10203221	2:72366819	T/C	CYP26B1	intron	0.869	1.10296	0.0341	0.004087		5
rs10207340	2:72371575	A/G	CYP26B1	intron,untranslated-5	0.937	0.89512	0.0481	0.02123		5
rs1079144	2:72366224	A/T	CYP26B1	intron	0.878	0.90946	0.0335	0.004574		5
rs114857151	2:72369839	T/C	CYP26B1	intron	0.707	1.04185	0.0385	0.2858		5
rs114924635	2:72372040	T/C	CYP26B1	intron,near-gene-5	0.699	1.10583	0.0686	0.1424		4
rs11884906	2:72361439	A/G	CYP26B1	intron	0.898	1.08817	0.0174	1.106E-6		5
rs12478279	2:72359518	A/G	CYP26B1	coding-synon	0.928	0.93857	0.0262	0.01547		5
rs138839924	2:72373691	C/G	CYP26B1	intron	0.840	1.13055	0.0444	0.005673		-
rs139298747	2:72368665	T/C	CYP26B1	intron	0.720	1.06545	0.0492	0.1976		-
rs181368915	2:72362880	C/G	CYP26B1	intron	0.720	1.06983	0.0628	0.2822		-
rs182188968	2:72371672	C/G	CYP26B1	intron,near-gene-5	0.667	0.89154	0.0337	0.0006683		-
rs189131864	2:72372700	T/C	CYP26B1	intron,near-gene-5	0.659	1.09702	0.0669	0.1664		-
rs191064414	2:72363537	A/G	CYP26B1	intron	0.941	0.90059	0.0448	0.01935		-
rs2241057	2:72361960	A/G	CYP26B1	missense	1.000	1.04991	0.0149	0.001061		5
rs2241058	2:72361865	A/C	CYP26B1	intron	0.994	0.95657	0.0151	0.003282		5
rs2241059	2:72359312	A/G	CYP26B1	untranslated-3	0.963	1.05001	0.0151	0.001282		5
rs2420201	2:72356370	A/G	CYP26B1	untranslated-3	0.950	1.05749	0.0264	0.034		7
rs61138718	2:72357336	T/C	CYP26B1	untranslated-3	0.948	0.95009	0.0153	0.0008035		5
rs6721986	2:72360795	A/G	CYP26B1	intron	0.899	1.05982	0.0250	0.02038		5
rs707718	2:72356449	T/G	CYP26B1	untranslated-3	0.927	0.99193	0.0138	0.5575		7
rs72846407	2:72363478	C/G	CYP26B1	intron	0.691	0.99461	0.0345	0.8752		5
rs72908315	2:72365567	T/C	CYP26B1	intron	0.868	0.90620	0.0348	0.004702		5
rs72908317	2:72366166	T/C	CYP26B1	intron	0.874	0.91311	0.0339	0.007366		5
rs887842	2:72356627	T/G	CYP26B1	untranslated-3	0.907	1.03107	0.0129	0.01761		7
rs9309462	2:72372986	T/C	CYP26B1	intron,near-gene-5	0.922	1.07219	0.0236	0.003132		2b
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information