ETF1

Basic Information

Gene Symbol	ETF1
Entrez Id	2107
Position	chr5:137841784..137878932
Description	eukaryotic translation termination factor 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10074396	5:137860291	A/G	ETF1	intron	0.752	0.97609	0.0199	0.2234		7
rs10077025	5:137845771	T/G	ETF1	intron	0.986	0.90520	0.0289	0.0005719		7
rs10077407	5:137849526	T/C	ETF1	intron	0.993	0.95171	0.0108	4.714E-6		7
rs113565428	5:137867597	A/G	ETF1	intron	0.792	1.07648	0.0375	0.04951		6
rs113898250	5:137868017	A/G	ETF1	intron	0.832	1.00120	0.0243	0.9611		5
rs114597467	5:137850888	A/G	ETF1	intron	0.817	1.08785	0.0387	0.02944		7
rs116390130	5:137869902	C/G	ETF1	intron	0.784	0.98324	0.0528	0.7492		3a
rs116788615	5:137864702	C/G	ETF1	intron	0.879	0.97395	0.0284	0.3525		7
rs11741702	5:137842787	A/C	ETF1	untranslated-3	0.969	0.90683	0.0288	0.0006769		5
rs12658925	5:137873946	T/C	ETF1	intron	0.978	0.95075	0.0112	6.905E-6		7
rs13155345	5:137854924	T/C	ETF1	intron	0.994	0.94073	0.0107	1.117E-8		4
rs13165101	5:137858382	A/C	ETF1	intron	0.788	0.91019	0.0343	0.006116		6
rs13165802	5:137858492	A/G	ETF1	intron	0.991	1.06173	0.0107	2.204E-8		7
rs13169274	5:137855305	T/C	ETF1	intron	0.985	0.94064	0.0107	1.196E-8		7
rs13171519	5:137859914	T/C	ETF1	intron	0.899	1.01796	0.0128	0.1647		7
rs13180122	5:137843742	A/C	ETF1	untranslated-3	0.803	1.08763	0.0338	0.01311		7
rs13187637	5:137876651	T/C	ETF1	intron	0.993	1.04728	0.0111	0.00003316		5
rs139758847	5:137852504	A/G	ETF1	intron	0.840	0.96329	0.0507	0.4598		-
rs140126831	5:137852767	T/C	ETF1	intron	0.659	1.03159	0.0478	0.5149		-
rs140246937	5:137878761	T/C	ETF1	intron,near-gene-5	0.711	0.93389	0.0575	0.2338		-
rs141555140	5:137860191	A/G	ETF1	intron	0.788	1.03780	0.0473	0.4321		-
rs142781962	5:137859631	T/C	ETF1	intron	0.855	0.95228	0.0478	0.3064		-
rs144762014	5:137856841	A/C	ETF1	intron	0.815	0.95695	0.0477	0.3563		-
rs150446164	5:137873725	A/G	ETF1	intron	0.899	0.98147	0.0172	0.2753		-
rs154067	5:137850059	A/G	ETF1	intron	0.993	1.05064	0.0108	4.882E-6		7
rs154068	5:137849659	C/G	ETF1	intron	0.986	1.10561	0.0289	0.0005107		6
rs154071	5:137875268	A/G	ETF1	intron	0.937	0.97287	0.0434	0.5265		5
rs154073	5:137858067	T/C	ETF1	intron	0.991	0.95247	0.0108	6.795E-6		6
rs154075	5:137862582	T/G	ETF1	intron	0.992	1.06046	0.0109	7.889E-8		7
rs154078	5:137866017	C/G	ETF1	intron	0.968	0.90656	0.0286	0.0005989		7
rs154080	5:137868817	A/C	ETF1	intron	0.785	0.92469	0.0237	0.000971		7
rs181014796	5:137866507	C/G	ETF1	intron	0.885	0.98748	0.0413	0.7611		-
rs182057197	5:137867669	A/G	ETF1	intron	0.664	0.97122	0.0373	0.4333		-
rs184247771	5:137873584	A/T	ETF1	intron	0.786	1.00501	0.0232	0.8286		-
rs185688297	5:137845773	A/G	ETF1	intron	0.657	1.03118	0.0477	0.5193		-
rs186665120	5:137860472	A/G	ETF1	intron	0.817	1.03603	0.0279	0.2051		-
rs2242599	5:137844274	A/G	ETF1	intron	0.991	1.05138	0.0108	3.694E-6		6
rs34498555	5:137862097	A/G	ETF1	intron	0.836	1.03221	0.0185	0.08738		6
rs34629616	5:137868606	T/C	ETF1	intron	0.990	1.04812	0.0112	0.00002518		6
rs35257420	5:137847709	A/G	ETF1	intron	0.880	0.96851	0.0150	0.03352		7
rs35485859	5:137865527	C/G	ETF1	intron	0.834	0.96870	0.0185	0.08587		6
rs3849046	5:137851192	T/C	ETF1	intron	0.993	1.06471	0.0107	4.833E-9		7
rs462623	5:137873408	T/C	ETF1	intron	0.992	0.90592	0.0287	0.0005673		6
rs467365	5:137873370	A/G	ETF1	intron	0.989	0.90547	0.0287	0.0005304		7
rs4835685	5:137846155	A/G	ETF1	intron	0.698	0.94412	0.0213	0.007038		6
rs4835687	5:137872056	A/G	ETF1	intron	0.992	1.04739	0.0111	0.00003283		7
rs4835688	5:137874003	T/C	ETF1	intron	0.903	1.01928	0.0138	0.1675		6
rs6871028	5:137873731	A/G	ETF1	intron	0.952	0.96214	0.0213	0.06983		6
rs6897807	5:137846042	A/G	ETF1	intron	0.917	1.09111	0.0279	0.001762		6
rs71596575	5:137869330	A/G	ETF1	intron	0.834	0.96735	0.0184	0.07101		7
rs72805820	5:137856635	A/T	ETF1	intron	0.801	0.91284	0.0406	0.0247		5
rs72805822	5:137863991	T/C	ETF1	intron	0.854	1.07037	0.0153	8.754E-6		4
rs76910446	5:137850136	T/C	ETF1	intron	0.857	0.99870	0.0237	0.958		7
rs77977963	5:137852474	T/C	ETF1	intron	0.711	0.93361	0.0574	0.232		6
rs9327813	5:137864421	A/T	ETF1	intron	0.985	1.04697	0.0113	0.00004536		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information