F2

Basic Information

Gene Symbol	F2
Entrez Id	2147
Position	chr11:46740743..46761056
Description	coagulation factor II (thrombin)
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs113202549	11:46741020	T/G	F2	intron	0.971	1.12412	0.0573	0.04113		4
rs113280020	11:46753469	T/G	F2	intron	0.978	0.94233	0.0207	0.004117		6
rs116429524	11:46759284	A/G	F2	intron	0.977	1.12176	0.0571	0.04417		6
rs140067493	11:46755441	T/C	F2	intron	0.661	0.98442	0.0403	0.6968		-
rs1799867	11:46747979	T/C	F2	intron	0.994	1.03438	0.0150	0.02449		4
rs1799963	11:46761055	A/G	F2	near-gene-3,untranslated-3	0.834	0.98689	0.0587	0.8219		7
rs185764303	11:46756234	A/G	F2	intron	0.647	0.94686	0.0541	0.3127		-
rs187481936	11:46757206	T/C	F2	intron	0.742	1.02881	0.0480	0.5534		-
rs2070850	11:46741495	T/C	F2	intron	0.981	0.96647	0.0152	0.02499		4
rs2070851	11:46744528	T/C	F2	intron	0.996	0.98728	0.0125	0.3039		5
rs2070852	11:46744925	C/G	F2	intron	1.000	0.96329	0.0114	0.001039		5
rs2282686	11:46750638	T/C	F2	intron	0.988	0.96271	0.0115	0.0009076		7
rs3136433	11:46741908	A/C	F2	intron	0.995	1.08654	0.0190	0.00001237		7
rs3136434	11:46742249	T/C	F2	intron	0.995	0.92035	0.0190	0.00001237		2b
rs3136435	11:46742426	A/G	F2	intron	0.996	1.07004	0.0204	0.0009151		2b
rs3136436	11:46742489	A/G	F2	intron	0.995	0.92035	0.0190	0.00001239		7
rs3136439	11:46743135	T/C	F2	intron	0.998	0.92072	0.0189	0.00001283		1f
rs3136441	11:46743247	T/C	F2	intron	0.998	1.03345	0.0150	0.02816		5
rs3136443	11:46743334	T/C	F2	intron	0.995	0.92035	0.0190	0.0000125		6
rs3136446	11:46744357	A/G	F2	intron	0.995	1.08654	0.0190	0.00001234		5
rs3136447	11:46744368	T/C	F2	intron	0.995	0.98659	0.0125	0.2813		5
rs3136448	11:46744369	A/G	F2	intron	0.996	1.08665	0.0190	0.00001186		5
rs3136449	11:46744470	A/G	F2	intron	0.998	0.96773	0.0150	0.02883		5
rs3136456	11:46745861	A/C	F2	intron	0.997	1.06364	0.0205	0.002605		5
rs3136457	11:46746258	C/G	F2	intron	0.997	0.96735	0.0150	0.0271		7
rs3136458	11:46746616	A/G	F2	intron	0.982	0.96503	0.0151	0.01854		6
rs3136460	11:46747065	C/G	F2	intron	0.996	1.03396	0.0150	0.02609		5
rs3136467	11:46749234	A/G	F2	intron	0.994	1.08709	0.0190	0.00001111		5
rs3136468	11:46749246	T/C	F2	intron	0.994	0.91989	0.0190	0.0000112		5
rs3136469	11:46749334	A/T	F2	intron	0.994	1.08709	0.0190	0.00001114		6
rs3136472	11:46750064	C/G	F2	intron	0.994	0.91980	0.0190	0.00001095		5
rs3136474	11:46750819	T/C	F2	intron	0.988	0.94045	0.0205	0.0027		5
rs3136480	11:46751848	T/G	F2	intron	0.993	0.91962	0.0190	0.00001047		5
rs3136481	11:46752659	T/G	F2	intron	0.993	1.08741	0.0190	0.00001034		7
rs3136482	11:46752958	T/C	F2	intron	0.993	0.91952	0.0190	0.00001028		6
rs3136487	11:46755464	A/G	F2	intron	0.947	0.91769	0.0190	6.1E-6		5
rs3136489	11:46755653	A/T	F2	intron	0.993	1.08763	0.0190	9.917E-6		5
rs3136490	11:46755794	T/C	F2	intron	0.971	1.06567	0.0204	0.001815		6
rs3136496	11:46758037	A/G	F2	intron	0.992	1.08752	0.0190	0.00001035		7
rs3136499	11:46758290	A/G	F2	intron	0.989	0.96291	0.0151	0.01254		4
rs3136500	11:46758383	T/C	F2	intron	0.992	1.08774	0.0190	9.906E-6		4
rs3136504	11:46758882	T/C	F2	intron	0.992	1.08774	0.0190	9.713E-6		7
rs3136505	11:46759571	A/G	F2	intron	0.964	0.97161	0.0117	0.01377		7
rs3136508	11:46759709	T/C	F2	intron	0.807	1.03780	0.0238	0.1188		6
rs3136512	11:46760120	T/C	F2	intron	0.960	0.98600	0.0108	0.1928		7
rs3136516	11:46760756	A/G	F2	intron	0.977	0.97317	0.0108	0.01175		4
rs3136520	11:46743232	T/C	F2	intron	0.926	1.03035	0.0329	0.3639		1f
rs3136521	11:46743432	A/G	F2	intron	0.996	1.08654	0.0190	0.0000123		7
rs3136524	11:46750525	A/G	F2	intron	0.842	1.04258	0.0431	0.3332		6
rs61884307	11:46755388	C/G	F2	intron	0.956	1.08872	0.0183	3.635E-6		5
rs75185853	11:46751401	T/C	F2	intron	0.990	1.03634	0.0151	0.01817		5
rs79487477	11:46751184	A/G	F2	intron	0.725	0.98128	0.0664	0.776		4
rs9794941	11:46738761	A/G	F2	near-gene-5	0.970	1.12468	0.0573	0.04026		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information