FAM109B

Basic Information

Gene Symbol	FAM109B
Entrez Id	150368
Position	chr22:42470255..42475442
Description	family with sequence similarity 109, member B
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs133379	22:42468535	A/G	FAM109B	near-gene-5	1.000	0.94290	0.0113	2.144E-7		1f
rs133380	22:42468910	T/C	FAM109B	near-gene-5	0.999	1.05432	0.0111	1.822E-6		1f
rs133381	22:42470608	C/G	FAM109B	intron	0.997	0.94696	0.0114	1.706E-6		4
rs143052156	22:42468309	T/C	FAM109B	near-gene-5	0.682	0.96928	0.0612	0.6101		-
rs2413667	22:42472237	A/C	FAM109B	intron	0.994	1.00180	0.0137	0.8979		5
rs28552546	22:42468526	T/G	FAM109B	near-gene-5	0.995	1.15777	0.0519	0.004754		4
rs45441993	22:42471738	A/C	FAM109B	intron	0.996	0.98699	0.0141	0.3512		5
rs4822088	22:42470589	C/G	FAM109B	intron	0.996	1.05338	0.0114	4.701E-6		3a
rs78725400	22:42470736	A/G	FAM109B	intron	0.990	1.02173	0.0323	0.5056		4
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information