FN1

Basic Information

Gene Symbol	FN1
Entrez Id	2335
Position	chr2:216225177..216300791
Description	fibronectin 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10168572	2:216257970	T/C	FN1	intron	0.801	1.04938	0.0344	0.162		6
rs10170514	2:216279936	A/T	FN1	intron	1.000	1.00491	0.0117	0.6789		6
rs10172425	2:216268355	A/G	FN1	intron	1.000	0.99302	0.0109	0.5215		6
rs10179882	2:216280877	T/G	FN1	intron	1.000	1.00411	0.0126	0.7478		7
rs10181380	2:216246266	A/G	FN1	intron	0.998	1.00713	0.0127	0.5732		6
rs10185587	2:216265246	A/G	FN1	intron	0.969	1.00020	0.0109	0.9847		7
rs10188325	2:216271510	A/T	FN1	intron	0.971	1.00351	0.0111	0.7533		6
rs10199059	2:216282974	T/C	FN1	intron	1.000	1.01005	0.0108	0.3527		1f
rs10201850	2:216239759	A/G	FN1	intron	0.990	0.99223	0.0127	0.5379		4
rs10202483	2:216297875	A/G	FN1	intron	1.010	1.00521	0.0126	0.6778		4
rs10202709	2:216298230	T/C	FN1	intron	1.000	1.00541	0.0126	0.6658		4
rs10207245	2:216280522	A/T	FN1	intron	1.000	0.98916	0.0108	0.3151		5
rs10498037	2:216230216	C/G	FN1	intron	0.995	0.99890	0.0208	0.9577		4
rs10498038	2:216256344	C/G	FN1	intron	0.852	1.01918	0.0255	0.4561		4
rs10804241	2:216236532	A/G	FN1	intron	0.960	1.00763	0.0126	0.5465		7
rs10804242	2:216256707	T/C	FN1	intron	0.974	0.98531	0.0109	0.176		5
rs10932613	2:216234657	A/G	FN1	intron	0.917	1.01359	0.0152	0.3745		7
rs111312017	2:216255066	T/C	FN1	intron	0.651	1.03894	0.0499	0.4438		5
rs111415420	2:216298652	T/C	FN1	intron	1.000	1.00521	0.0126	0.6774		4
rs112142865	2:216291892	A/G	FN1	intron	1.000	1.00521	0.0126	0.6799		6
rs112244322	2:216246417	A/G	FN1	intron	0.735	1.00220	0.0202	0.9118		7
rs112273511	2:216235738	A/G	FN1	intron	0.700	1.09790	0.0552	0.09033		7
rs113029097	2:216235802	T/C	FN1	intron	0.639	1.06364	0.0563	0.2731		7
rs113404955	2:216292090	T/G	FN1	intron	0.884	1.05043	0.0542	0.3642		7
rs114497844	2:216226630	C/G	FN1	intron,missense	0.835	1.01511	0.0503	0.7657		4
rs115420251	2:216227619	A/G	FN1	intron	0.747	1.03998	0.0650	0.5466		4
rs11687442	2:216246210	T/G	FN1	intron	0.990	1.00180	0.0116	0.8794		6
rs11690611	2:216227187	T/C	FN1	intron	0.980	1.01379	0.0146	0.3469		5
rs11883812	2:216256981	T/C	FN1	intron	0.967	1.01197	0.0197	0.5449		4
rs11897227	2:216250051	A/G	FN1	intron	0.992	1.00733	0.0125	0.5593		6
rs11897252	2:216250263	T/C	FN1	intron	0.983	1.00763	0.0125	0.5427		7
rs12105173	2:216282681	A/C	FN1	intron	1.000	0.99561	0.0117	0.7059		3a
rs12466925	2:216238607	A/G	FN1	intron	0.965	1.00924	0.0126	0.4646		7
rs12468524	2:216250745	T/C	FN1	intron	0.989	1.00844	0.0125	0.5002		7
rs1250201	2:216249819	T/C	FN1	intron	0.994	0.95801	0.0267	0.1088		6
rs1250203	2:216248305	T/G	FN1	intron	0.998	1.00280	0.0174	0.8701		5
rs1250204	2:216243832	T/C	FN1	intron	0.993	1.04060	0.0268	0.1372		5
rs1250211	2:216233698	A/G	FN1	intron	0.940	0.98590	0.0112	0.2053		1f
rs1250213	2:216232299	A/C	FN1	intron	0.958	0.98432	0.0116	0.1753		6
rs1250214	2:216232121	T/C	FN1	intron	0.959	0.98413	0.0116	0.1686		6
rs1250215	2:216253039	C/G	FN1	intron	0.991	0.99114	0.0111	0.4248		3a
rs1250238	2:216294663	A/G	FN1	intron	0.999	1.01582	0.0127	0.2166		5
rs1250240	2:216295014	A/G	FN1	intron	0.982	0.98708	0.0123	0.2912		5
rs1250242	2:216296257	C/G	FN1	intron	0.983	1.01278	0.0123	0.3013		5
rs1250243	2:216297656	T/C	FN1	intron	0.997	0.98511	0.0127	0.2379		4
rs1250244	2:216297796	C/G	FN1	intron	0.982	1.01278	0.0123	0.3011		4
rs1250245	2:216298781	T/C	FN1	intron	0.993	0.98669	0.0108	0.2122		5
rs1250246	2:216299281	A/C	FN1	intron	0.992	0.98649	0.0108	0.2056		1b
rs1250247	2:216299629	C/G	FN1	intron	0.980	0.98857	0.0124	0.3538		3a
rs1250248	2:216287093	A/G	FN1	intron	0.988	0.98916	0.0123	0.3753		5
rs1250251	2:216290344	T/C	FN1	intron	1.000	1.01258	0.0127	0.3249		5
rs1250257	2:216265921	A/G	FN1	intron	0.943	1.00652	0.0122	0.5917		6
rs1250268	2:216281122	T/C	FN1	intron	0.995	1.05222	0.0368	0.1658		5
rs1250269	2:216281414	A/T	FN1	intron	0.995	1.05232	0.0368	0.1656		6
rs12615520	2:216291541	T/C	FN1	intron	0.997	1.01329	0.0127	0.3		7
rs12694363	2:216254032	A/G	FN1	intron	0.992	1.00552	0.0112	0.6275		6
rs12991003	2:216275260	T/C	FN1	intron	0.879	0.99920	0.0116	0.9417		7
rs13004592	2:216276991	T/C	FN1	intron	0.984	1.00763	0.0109	0.4836		3a
rs13015576	2:216266536	T/C	FN1	intron	0.994	0.99243	0.0125	0.5439		6
rs13018173	2:216248606	T/C	FN1	intron	0.993	0.99253	0.0125	0.5466		7
rs13020766	2:216275771	A/G	FN1	intron	0.981	0.99223	0.0110	0.4789		2b
rs13021377	2:216276042	A/G	FN1	intron	0.990	0.99710	0.0115	0.8029		5
rs13021679	2:216276375	T/C	FN1	intron	0.974	1.00753	0.0125	0.5478		6
rs1313044	2:216235388	A/G	FN1	intron	0.887	0.99332	0.0113	0.552		5
rs13306359	2:216269095	T/C	FN1	intron	0.996	0.99273	0.0109	0.5054		6
rs13385786	2:216242191	C/G	FN1	intron	0.862	1.04133	0.0262	0.122		5
rs13394662	2:216226642	A/C	FN1	intron,missense	0.988	0.98620	0.0111	0.211		4
rs13394972	2:216287097	A/G	FN1	intron	1.000	0.99531	0.0126	0.7078		5
rs13414859	2:216243342	A/C	FN1	intron	0.998	0.99273	0.0127	0.5628		6
rs13416478	2:216285729	T/C	FN1	intron	1.000	1.00441	0.0126	0.7248		7
rs13423742	2:216287796	C/G	FN1	intron	0.988	1.01157	0.0124	0.353		7
rs13431081	2:216235538	A/G	FN1	intron	0.926	0.98079	0.0111	0.07912		4
rs13432972	2:216248460	A/C	FN1	intron	0.998	0.99302	0.0127	0.5806		5
rs1347694	2:216283558	A/C	FN1	intron	1.000	1.01532	0.0126	0.2291		4
rs13652	2:216249587	T/C	FN1	coding-synon	1.000	0.99273	0.0165	0.6594		7
rs1370561	2:216244464	A/G	FN1	intron	0.996	0.99025	0.0108	0.365		3a
rs139078629	2:216251538	A/G	FN1	missense	0.699	0.87214	0.0681	0.04466		-
rs142545267	2:216227624	T/C	FN1	intron	0.886	1.01847	0.0571	0.7479		-
rs144505974	2:216283336	T/C	FN1	intron	0.917	1.03241	0.0568	0.5742		-
rs146449490	2:216239165	A/G	FN1	intron	0.957	1.00813	0.0546	0.8816		-
rs146512128	2:216251271	A/G	FN1	intron	0.900	0.95638	0.0580	0.4417		-
rs147432901	2:216232363	T/C	FN1	intron	0.894	0.97443	0.0536	0.6289		-
rs149398898	2:216268193	T/C	FN1	intron	0.812	1.05686	0.0358	0.1227		-
rs1525351	2:216263366	A/G	FN1	intron	0.994	0.99960	0.0108	0.9702		5
rs1525352	2:216263336	A/G	FN1	intron	0.994	0.99980	0.0108	0.9842		5
rs1561301	2:216259989	C/G	FN1	intron	0.983	0.99970	0.0108	0.9802		6
rs1561302	2:216260298	A/G	FN1	intron	0.994	0.99591	0.0125	0.7434		5
rs16853839	2:216230033	T/C	FN1	intron	0.895	0.97414	0.0536	0.6252		4
rs16853844	2:216234616	A/G	FN1	intron	0.881	1.03015	0.0540	0.5823		7
rs16853861	2:216241585	A/T	FN1	intron	0.730	1.02378	0.0449	0.6006		6
rs16853986	2:216273202	A/G	FN1	intron	0.648	1.01157	0.0403	0.7749		6
rs16854041	2:216287497	A/G	FN1	intron	0.988	1.00622	0.0123	0.6162		5
rs16854055	2:216290673	A/T	FN1	intron	1.000	0.99471	0.0126	0.6751		4
rs17449032	2:216236712	T/C	FN1	missense	0.956	0.97990	0.0390	0.6035		5
rs17456054	2:216255526	T/C	FN1	intron	0.898	0.98886	0.0161	0.485		5
rs17456939	2:216271644	T/C	FN1	intron	0.986	0.99263	0.0110	0.502		6
rs17457002	2:216271763	A/T	FN1	intron	0.986	1.00672	0.0110	0.544		6
rs17457029	2:216272514	A/G	FN1	intron	0.974	1.00140	0.0129	0.915		4
rs17457252	2:216276856	A/T	FN1	intron	0.983	0.99045	0.0125	0.4436		5
rs17457391	2:216280006	T/C	FN1	intron	0.998	0.97161	0.0227	0.203		5
rs17458018	2:216285375	T/C	FN1	intron	0.991	1.02973	0.0226	0.1962		4
rs17514904	2:216236147	T/C	FN1	intron	0.939	0.98985	0.0550	0.8527		7
rs17515300	2:216247455	A/G	FN1	intron	0.844	1.00763	0.0320	0.8118		6
rs17516906	2:216279273	A/G	FN1	intron,near-gene-3	0.998	1.02932	0.0226	0.2012		7
rs17517509	2:216284774	T/C	FN1	intron	1.000	1.01450	0.0126	0.2547		3a
rs17517928	2:216291359	T/C	FN1	intron	0.982	0.99541	0.0124	0.7128		3a
rs181226717	2:216250010	T/C	FN1	intron	0.996	0.98866	0.0201	0.5696		-
rs181399493	2:216254406	A/G	FN1	intron	0.641	0.98778	0.0548	0.823		-
rs189876890	2:216258633	A/C	FN1	intron	0.813	0.98442	0.0528	0.7661		-
rs190493286	2:216235803	T/C	FN1	intron	0.880	0.94961	0.0603	0.3915		-
rs191619254	2:216265962	A/G	FN1	intron	0.854	1.02265	0.0138	0.1048		-
rs192213167	2:216238685	A/G	FN1	intron	0.814	1.01582	0.0455	0.7303		-
rs1968509	2:216255265	T/C	FN1	intron	0.986	0.95724	0.0268	0.1026		4
rs1968510	2:216258251	A/G	FN1	intron	0.994	0.99700	0.0186	0.8713		7
rs1975319	2:216260180	T/C	FN1	intron	0.986	1.00250	0.0128	0.8428		4
rs2289198	2:216246658	A/T	FN1	intron	0.994	1.00783	0.0125	0.5304		7
rs2289199	2:216237929	A/T	FN1	intron	0.978	0.99253	0.0125	0.5478		6
rs2289200	2:216232978	A/C	FN1	intron	0.996	1.00632	0.0116	0.5836		3a
rs2289202	2:216298084	A/G	FN1	coding-synon	1.000	1.00602	0.0126	0.6318		4
rs2304573	2:216243650	A/G	FN1	intron	0.995	0.99193	0.0125	0.5178		6
rs2372544	2:216264270	T/G	FN1	intron	0.996	0.99293	0.0109	0.5175		6
rs2372545	2:216273625	A/C	FN1	intron	0.977	1.00854	0.0111	0.4433		5
rs2462591	2:216265102	T/C	FN1	intron	0.994	0.99990	0.0108	0.9948		7
rs2577289	2:216290147	A/T	FN1	intron	1.000	1.01298	0.0127	0.3072		4
rs2577290	2:216299550	A/G	FN1	intron	0.928	1.01623	0.0136	0.2346		4
rs2577297	2:216262788	A/G	FN1	intron	0.993	1.00010	0.0108	0.9898		4
rs2577298	2:216263706	A/G	FN1	intron	0.994	0.99990	0.0108	0.9899		7
rs2577302	2:216257265	T/G	FN1	intron	0.976	1.04749	0.0307	0.1304		7
rs2692222	2:216264905	T/C	FN1	intron	0.994	1.00000	0.0108	0.997		5
rs2692223	2:216264859	T/C	FN1	intron	0.991	1.00110	0.0108	0.9209		5
rs2692224	2:216263926	A/C	FN1	intron	0.994	0.99990	0.0108	0.9939		5
rs2692227	2:216260557	A/G	FN1	intron	0.983	0.99970	0.0108	0.9774		5
rs2692228	2:216259878	T/C	FN1	intron	0.983	1.00050	0.0108	0.9654		5
rs2692230	2:216257347	A/C	FN1	intron	0.974	0.95791	0.0298	0.1496		7
rs2692234	2:216299551	A/C	FN1	intron	0.920	1.01806	0.0137	0.1899		4
rs28631799	2:216236208	T/C	FN1	intron	0.956	1.01633	0.0109	0.1363		6
rs2888354	2:216252756	T/C	FN1	intron	0.991	0.99263	0.0125	0.5553		5
rs33996776	2:216232108	A/G	FN1	intron	0.995	0.97873	0.0114	0.05935		6
rs34255697	2:216266225	A/C	FN1	intron	0.999	0.99263	0.0109	0.4971		3a
rs34923683	2:216245694	A/C	FN1	coding-synon,intron	0.775	0.92589	0.0402	0.05553		4
rs35343655	2:216251697	A/G	FN1	intron	0.992	1.00733	0.0125	0.5587		6
rs35800609	2:216275219	A/G	FN1	intron	0.981	1.00833	0.0125	0.5078		5
rs3796123	2:216283958	A/T	FN1	intron	1.000	1.01471	0.0126	0.2492		3a
rs41347752	2:216242615	C/G	FN1	intron	0.664	1.10960	0.0577	0.07165		6
rs4328631	2:216256221	T/G	FN1	intron	0.977	1.01430	0.0109	0.1943		5
rs4622720	2:216281630	C/G	FN1	intron	1.000	1.01450	0.0126	0.2551		3a
rs58298905	2:216277130	A/G	FN1	intron	0.945	0.99015	0.0131	0.452		4
rs62181365	2:216291840	T/C	FN1	intron	0.939	1.00130	0.0128	0.921		7
rs62183108	2:216277900	T/C	FN1	intron	0.993	0.96812	0.0227	0.1535		5
rs62183109	2:216278061	T/C	FN1	intron	0.965	0.96638	0.0224	0.1266		5
rs62202761	2:216265596	A/G	FN1	intron	0.970	1.00230	0.0109	0.835		7
rs62202762	2:216265600	T/C	FN1	intron	0.976	1.00160	0.0109	0.8796		7
rs62202763	2:216268575	T/C	FN1	intron	0.972	1.01197	0.0206	0.5632		7
rs62202764	2:216270146	A/T	FN1	intron	0.992	0.96329	0.0227	0.09942		7
rs62202778	2:216271675	C/G	FN1	intron	0.970	1.01217	0.0206	0.5557		7
rs6435903	2:216252300	T/C	FN1	intron	0.996	0.99283	0.0127	0.5707		5
rs6435904	2:216254562	A/T	FN1	intron	0.986	0.95619	0.0267	0.0931		4
rs6435905	2:216256775	A/G	FN1	intron	0.972	1.01390	0.0109	0.205		5
rs6435906	2:216269640	A/G	FN1	intron	0.996	0.99273	0.0109	0.505		5
rs6707530	2:216240584	T/G	FN1	intron	0.997	0.99203	0.0124	0.5209		5
rs6709607	2:216256615	T/C	FN1	intron	0.975	0.98620	0.0109	0.2009		5
rs6716361	2:216242416	C/G	FN1	intron	0.878	0.99780	0.0298	0.9419		6
rs6731557	2:216281619	C/G	FN1	intron	1.000	1.00441	0.0117	0.7053		4
rs6734955	2:216282017	A/G	FN1	intron	1.000	1.00391	0.0126	0.7582		5
rs6744921	2:216266736	A/G	FN1	intron	0.999	1.00461	0.0109	0.6707		5
rs71428382	2:216259479	A/G	FN1	intron	0.850	0.98590	0.0200	0.4768		7
rs71428385	2:216288777	A/G	FN1	intron	0.915	0.97580	0.0247	0.3211		5
rs72942065	2:216251279	T/C	FN1	intron	0.782	0.91147	0.0605	0.1251		7
rs75072930	2:216228227	T/C	FN1	intron	0.994	0.99501	0.0221	0.8215		5
rs75158601	2:216234098	A/C	FN1	intron	0.948	0.99730	0.0227	0.9038		5
rs75737990	2:216231723	A/G	FN1	intron	0.991	0.99900	0.0208	0.9611		3a
rs7575234	2:216268902	T/C	FN1	intron	0.997	1.00743	0.0125	0.5513		5
rs7579867	2:216229850	T/C	FN1	intron	0.990	1.01552	0.0118	0.1925		6
rs75853925	2:216290202	T/C	FN1	intron	0.873	1.00632	0.0301	0.8351		5
rs7588830	2:216277672	T/C	FN1	intron	0.995	1.01379	0.0127	0.2801		4
rs7592898	2:216271812	A/T	FN1	intron	0.986	1.00743	0.0110	0.5022		5
rs75933553	2:216249117	T/C	FN1	intron	0.765	1.03427	0.0356	0.3437		7
rs7594168	2:216230081	T/C	FN1	intron	0.985	0.98511	0.0117	0.1991		1b
rs7596677	2:216272907	A/T	FN1	coding-synon	0.977	0.99352	0.0124	0.6009		5
rs7608342	2:216246080	A/G	FN1	intron	0.995	1.01025	0.0108	0.3457		6
rs76912016	2:216254576	C/G	FN1	intron	0.650	0.94554	0.0697	0.4219		4
rs78210391	2:216273212	A/C	FN1	intron	0.857	1.01949	0.0467	0.6799		7
rs78321538	2:216258169	A/T	FN1	intron	0.782	1.01928	0.0152	0.2105		6
rs79034648	2:216275196	A/G	FN1	intron	0.914	1.03417	0.0311	0.279		4
rs79603802	2:216287234	T/C	FN1	intron	0.903	1.05169	0.0543	0.3538		7
rs80095429	2:216245891	A/T	FN1	intron	0.742	0.98501	0.0314	0.6297		7
rs9288508	2:216281362	T/C	FN1	intron	0.994	0.94961	0.0366	0.1574		7
rs940738	2:216256227	C/G	FN1	intron	0.977	0.98610	0.0109	0.1993		5
rs940740	2:216273452	A/G	FN1	intron	0.990	0.99661	0.0118	0.7751		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information