GFRA3

Basic Information

Gene Symbol	GFRA3
Entrez Id	2676
Position	chr5:137588069..137610253
Description	GDNF family receptor alpha 3
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10036665	5:137588149	A/T	GFRA3	untranslated-3	0.981	1.04739	0.0139	0.0008563		5
rs10053541	5:137591875	A/G	GFRA3	intron	0.994	0.99710	0.0110	0.791		7
rs10055120	5:137592266	T/C	GFRA3	intron	0.985	1.04739	0.0138	0.0008022		6
rs10061456	5:137591953	T/C	GFRA3	intron	0.911	1.00250	0.0114	0.8263		7
rs10952	5:137588340	A/T	GFRA3	untranslated-3	1.000	0.99661	0.0109	0.7546		7
rs111226427	5:137601515	T/G	GFRA3	intron	0.931	1.05306	0.0172	0.002711		7
rs111229419	5:137606261	C/G	GFRA3	intron	0.938	0.94933	0.0513	0.3105		6
rs112298738	5:137591811	T/C	GFRA3	intron	0.967	1.02922	0.0313	0.3575		6
rs113524394	5:137590802	C/G	GFRA3	intron	0.974	0.95390	0.0295	0.1104		6
rs113913981	5:137590001	T/C	GFRA3	intron	0.974	0.95399	0.0295	0.1105		6
rs114801866	5:137595914	T/G	GFRA3	intron	0.862	1.01136	0.0421	0.7881		7
rs115535251	5:137594169	T/C	GFRA3	intron	0.845	0.91585	0.0642	0.1707		7
rs116268521	5:137589879	T/C	GFRA3	intron	0.836	1.00803	0.0275	0.7706		6
rs116792216	5:137599682	T/G	GFRA3	intron	0.881	1.12851	0.0307	0.00008338		7
rs11950736	5:137598340	A/G	GFRA3	intron	0.992	1.05211	0.0136	0.0001924		7
rs12055045	5:137608056	T/C	GFRA3	intron	0.986	0.97599	0.0127	0.05486		7
rs13160114	5:137591602	A/G	GFRA3	intron	0.968	1.00401	0.0112	0.7197		6
rs13436575	5:137600933	T/G	GFRA3	intron	0.999	1.00421	0.0110	0.7014		6
rs13436625	5:137601014	T/C	GFRA3	intron	0.977	1.00190	0.0111	0.861		7
rs138303036	5:137603888	T/C	GFRA3	intron	0.699	0.94393	0.0549	0.2934		-
rs139478512	5:137593721	A/C	GFRA3	intron	0.845	0.91594	0.0642	0.1713		-
rs140172510	5:137609326	C/G	GFRA3	intron	0.753	1.01959	0.0526	0.7122		-
rs150336400	5:137591509	A/T	GFRA3	intron	0.984	0.89422	0.0324	0.0005496		-
rs183521038	5:137606743	A/G	GFRA3	intron	0.791	1.00140	0.0653	0.983		-
rs184343110	5:137596334	T/G	GFRA3	intron	0.794	1.01582	0.0582	0.7867		-
rs184489776	5:137593889	C/G	GFRA3	intron	0.696	0.95495	0.0504	0.3608		-
rs186968083	5:137607718	A/G	GFRA3	intron	0.736	0.97932	0.0548	0.7022		-
rs28704868	5:137590786	A/G	GFRA3	intron	0.997	0.99661	0.0110	0.7557		6
rs35002324	5:137605401	A/G	GFRA3	intron	1.000	0.98708	0.0125	0.2985		7
rs35837290	5:137592377	T/C	GFRA3	intron	0.998	0.98679	0.0126	0.2933		6
rs4835673	5:137607680	T/C	GFRA3	intron	0.997	1.00642	0.0109	0.5593		6
rs4835772	5:137596291	C/G	GFRA3	intron	0.679	1.06492	0.0520	0.2263		6
rs62381801	5:137607742	T/C	GFRA3	intron	0.763	0.96435	0.0586	0.5351		6
rs6882682	5:137602546	T/C	GFRA3	intron	0.998	0.99015	0.0108	0.3577		7
rs74810661	5:137609836	A/G	GFRA3	intron	0.851	0.99850	0.0281	0.9582		5
rs76249205	5:137598356	T/G	GFRA3	intron	0.704	1.01238	0.0422	0.7715		7
rs77536832	5:137588937	T/C	GFRA3	intron	0.927	1.02204	0.0196	0.2644		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information