GLT8D1

Basic Information

Gene Symbol	GLT8D1
Entrez Id	55830
Position	chr3:52728500..52740099
Description	glycosyltransferase 8 domain containing 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs13081155	3:52732429	A/G	GLT8D1	intron	0.990	1.06513	0.0106	2.297E-9		5
rs145385663	3:52737325	A/C	GLT8D1	intron	0.703	0.97814	0.0331	0.5047		-
rs147975364	3:52734632	A/G	GLT8D1	intron	0.602	0.84891	0.0372	0.00001084		-
rs2164885	3:52731269	T/C	GLT8D1	intron	0.990	1.05159	0.0107	2.6E-6		1d
rs6765687	3:52733106	T/C	GLT8D1	intron	0.885	1.07638	0.0128	9.278E-9		6
rs79705974	3:52736442	A/G	GLT8D1	intron	0.999	1.07037	0.0406	0.09402		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information