HARS

Basic Information

Gene Symbol	HARS
Entrez Id	3035
Position	chr5:140053490..140070971
Description	histidyl-tRNA synthetase
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1089304	5:140066500	T/G	HARS	intron,near-gene-5	1.000	0.97453	0.0129	0.04482		6
rs1089305	5:140066306	T/C	HARS	intron,near-gene-5	1.000	0.95447	0.0105	9.621E-6		6
rs111314092	5:140057838	T/C	HARS	intron	0.659	1.08426	0.0388	0.03717		5
rs113627177	5:140054858	T/G	HARS	intron,near-gene-5	0.667	1.07294	0.0431	0.1019		5
rs115091892	5:140066881	T/G	HARS	intron,near-gene-5	0.723	1.03355	0.0395	0.4025		7
rs11954514	5:140056775	A/C	HARS	intron	0.896	1.02409	0.0165	0.1505		7
rs139145072	5:140065065	A/G	HARS	intron,near-gene-5	0.890	0.98285	0.0398	0.664		-
rs142880704	5:140055015	A/G	HARS	intron,near-gene-5	0.946	1.01248	0.0342	0.7166		-
rs187136933	5:140067645	T/C	HARS	intron	0.656	0.97638	0.0574	0.6778		-
rs190289555	5:140066028	T/C	HARS	intron,near-gene-5	0.634	0.92886	0.0549	0.1787		-
rs2073512	5:140058893	T/C	HARS	intron	1.000	1.04008	0.0122	0.001291		1f
rs2230361	5:140057535	A/G	HARS	coding-synon	0.767	0.98305	0.0248	0.4919		5
rs2530239	5:140062547	T/C	HARS	intron	1.000	1.04456	0.0105	0.00003351		6
rs2530240	5:140060547	T/C	HARS	intron	1.000	0.95409	0.0105	8.037E-6		6
rs2530241	5:140054485	T/C	HARS	intron,near-gene-5	1.000	1.04812	0.0105	8.192E-6		1f
rs58302597	5:140054257	T/C	HARS	intron,near-gene-5	1.000	1.04060	0.0122	0.001092		2b
rs61093427	5:140061761	T/C	HARS	intron	0.990	1.03863	0.0121	0.001789		6
rs702396	5:140068108	C/G	HARS	intron	1.000	0.97404	0.0129	0.04111		6
rs811382	5:140057216	A/G	HARS	intron	1.000	1.02675	0.0129	0.04033		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information