HARS2

Basic Information

Gene Symbol	HARS2
Entrez Id	23438
Position	chr5:140071018..140078890
Description	histidyl-tRNA synthetase 2, mitochondrial
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10515510	5:140073745	C/G	HARS2	intron	0.790	1.04050	0.0293	0.176		7
rs112859141	5:140072811	A/G	HARS2	intron,near-gene-5	0.999	1.04133	0.0122	0.0009046		6
rs113720830	5:140072409	T/C	HARS2	intron,near-gene-5	0.995	1.04164	0.0122	0.0008364		7
rs17119056	5:140075474	T/C	HARS2	intron	0.931	1.02727	0.0198	0.1737		7
rs2530235	5:140072647	T/G	HARS2	intron,near-gene-5	1.000	1.04802	0.0105	8.317E-6		7
rs2563304	5:140072057	T/C	HARS2	intron,near-gene-5	1.000	1.04781	0.0105	9.428E-6		1f
rs2563305	5:140071735	A/G	HARS2	intron,near-gene-5	1.000	0.97443	0.0129	0.04409		5
rs6883035	5:140073883	A/G	HARS2	intron	0.999	1.04123	0.0122	0.0009334		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information