IGSF9B

Basic Information

Gene Symbol	IGSF9B
Entrez Id	22997
Position	chr11:133785185..133826880
Description	immunoglobulin superfamily, member 9B
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10444323	11:133811160	T/C	IGSF9B	intron	0.989	1.03686	0.0122	0.003085		5
rs10791338	11:133788869	A/G	IGSF9B	intron	0.918	0.97599	0.0126	0.05277		5
rs10894763	11:133799408	T/C	IGSF9B	intron	0.970	1.02716	0.0132	0.04262		5
rs10894764	11:133803239	A/G	IGSF9B	intron	0.979	0.98265	0.0135	0.1966		4
rs10894765	11:133808184	T/C	IGSF9B	intron	0.983	1.01045	0.0131	0.426		5
rs10894767	11:133811531	A/G	IGSF9B	intron	0.984	1.03717	0.0123	0.002994		5
rs10894768	11:133815981	C/G	IGSF9B	coding-synon	0.935	0.96628	0.0117	0.003341		2b
rs10894769	11:133816224	T/C	IGSF9B	intron	0.908	1.04530	0.0149	0.00283		5
rs111254337	11:133807156	A/G	IGSF9B	intron	0.922	1.02173	0.0581	0.7106		4
rs111949841	11:133815941	A/G	IGSF9B	intron	0.820	1.02542	0.0590	0.67		4
rs11223639	11:133819442	A/G	IGSF9B	intron	0.974	0.99940	0.0159	0.9689		5
rs115002583	11:133821132	A/C	IGSF9B	intron	0.953	0.90511	0.0209	1.87E-6		2a
rs116842826	11:133786698	A/G	IGSF9B	intron	0.935	0.99114	0.0514	0.8629		5
rs117185333	11:133784377	T/C	IGSF9B	intron	0.702	0.93641	0.0812	0.4186		7
rs117328238	11:133794734	A/G	IGSF9B	coding-synon	0.953	1.02112	0.0534	0.6963		5
rs117543931	11:133784383	T/C	IGSF9B	intron	0.764	1.00975	0.0642	0.8799		7
rs118031494	11:133821144	A/G	IGSF9B	intron	0.953	0.90511	0.0209	1.877E-6		2a
rs11825659	11:133795519	A/G	IGSF9B	intron	0.945	0.93969	0.0553	0.2601		5
rs12270042	11:133811464	A/G	IGSF9B	intron	0.990	1.01086	0.0186	0.5613		5
rs12273435	11:133825855	A/G	IGSF9B	intron	0.911	1.01227	0.0131	0.3514		5
rs12278050	11:133809032	T/C	IGSF9B	intron	0.989	1.03417	0.0123	0.006275		5
rs12291005	11:133815951	C/G	IGSF9B	intron	0.954	0.98679	0.0159	0.4046		4
rs12792462	11:133803635	T/C	IGSF9B	intron	0.712	1.00391	0.0369	0.9154		5
rs12792661	11:133826414	A/G	IGSF9B	intron	0.875	1.01096	0.0141	0.4391		5
rs12796441	11:133800773	A/C	IGSF9B	intron	0.962	1.01593	0.0114	0.1645		4
rs12800905	11:133788992	T/C	IGSF9B	intron	0.934	1.02378	0.0113	0.03707		5
rs12801289	11:133789199	T/G	IGSF9B	intron	0.914	0.96957	0.0111	0.005232		5
rs12804787	11:133811072	A/G	IGSF9B	intron	0.905	0.98226	0.0216	0.4058		5
rs140831590	11:133815914	A/C	IGSF9B	intron	0.973	0.95275	0.0391	0.2164		-
rs140976709	11:133792168	A/G	IGSF9B	intron	0.909	0.96223	0.0366	0.2919		-
rs141060929	11:133813244	A/G	IGSF9B	intron	0.854	0.97951	0.0493	0.6748		-
rs141872555	11:133789544	C/G	IGSF9B	intron	0.822	1.02183	0.0487	0.658		-
rs145205826	11:133808641	C/G	IGSF9B	intron	0.721	1.20852	0.0631	0.002695		-
rs146005464	11:133822529	A/G	IGSF9B	intron	0.644	0.88356	0.0508	0.01475		-
rs146371753	11:133807518	A/G	IGSF9B	intron	0.974	0.95132	0.0391	0.2015		-
rs146787714	11:133794002	T/C	IGSF9B	intron	0.823	1.06460	0.0597	0.2941		-
rs149466003	11:133800611	A/G	IGSF9B	intron	0.942	0.97297	0.0427	0.5217		-
rs1612416	11:133797646	A/C	IGSF9B	intron	0.979	1.02286	0.0113	0.0456		4
rs1793680	11:133798762	T/C	IGSF9B	intron	0.988	0.96050	0.0110	0.0002442		4
rs181367200	11:133816786	A/G	IGSF9B	intron	0.691	0.99094	0.0505	0.8573		-
rs182460607	11:133825739	T/G	IGSF9B	intron	0.672	1.04425	0.0516	0.4017		-
rs184864317	11:133788107	A/G	IGSF9B	intron	0.680	1.04029	0.0496	0.4256		-
rs192322610	11:133818911	T/C	IGSF9B	intron	0.738	1.00692	0.0594	0.9069		-
rs193272907	11:133793869	A/T	IGSF9B	intron	0.609	0.99710	0.0452	0.949		-
rs2027788	11:133792736	A/G	IGSF9B	intron	0.980	0.97171	0.0107	0.007478		5
rs2062368	11:133794488	T/C	IGSF9B	intron	0.992	0.96618	0.0106	0.001216		5
rs28428505	11:133814468	T/C	IGSF9B	intron	0.987	1.03697	0.0122	0.002985		5
rs329635	11:133807819	A/G	IGSF9B	coding-synon	0.939	0.97873	0.0170	0.2057		5
rs329636	11:133807097	A/G	IGSF9B	intron	0.975	1.03138	0.0117	0.008221		4
rs329637	11:133805585	T/C	IGSF9B	coding-synon	0.992	0.95094	0.0107	2.554E-6		5
rs329640	11:133821131	A/G	IGSF9B	intron	0.974	1.02368	0.0108	0.03006		2a
rs329641	11:133811396	A/T	IGSF9B	intron	0.998	0.94895	0.0106	8.01E-7		5
rs329642	11:133812299	T/C	IGSF9B	intron	0.997	1.05401	0.0107	7.81E-7		5
rs329643	11:133812526	T/C	IGSF9B	intron	0.991	1.03004	0.0116	0.0106		5
rs329644	11:133812944	C/G	IGSF9B	intron	0.990	1.02973	0.0116	0.01152		5
rs329645	11:133813168	T/C	IGSF9B	intron	0.989	0.96986	0.0117	0.008727		5
rs329646	11:133813626	A/G	IGSF9B	intron	0.998	0.94942	0.0106	1.014E-6		5
rs329666	11:133796732	C/G	IGSF9B	intron	0.934	1.00562	0.0282	0.8414		5
rs329667	11:133796538	A/G	IGSF9B	intron	0.987	0.95791	0.0108	0.00006864		5
rs329668	11:133795219	T/C	IGSF9B	intron	0.991	1.01268	0.0150	0.3994		5
rs329669	11:133795017	A/G	IGSF9B	intron	0.994	0.96541	0.0109	0.001247		5
rs329670	11:133794599	T/C	IGSF9B	intron	0.897	0.99312	0.0164	0.6738		5
rs329671	11:133801262	A/G	IGSF9B	intron,near-gene-5	0.981	0.95667	0.0111	0.00006314		5
rs329672	11:133799132	T/C	IGSF9B	intron	0.983	0.98039	0.0109	0.07092		5
rs329673	11:133798999	T/C	IGSF9B	intron	0.986	0.98985	0.0135	0.4494		4
rs329676	11:133781191	C/G	IGSF9B	intron	0.984	1.02912	0.0111	0.00956		4
rs329677	11:133785194	A/G	IGSF9B	intron	0.977	0.97756	0.0113	0.04505		6
rs34274954	11:133792060	A/T	IGSF9B	intron	0.949	0.99481	0.0250	0.8353		5
rs34631144	11:133791928	A/G	IGSF9B	intron	0.949	0.97560	0.0270	0.3604		5
rs34732290	11:133824093	T/C	IGSF9B	intron	0.919	0.99392	0.0286	0.8302		5
rs34845616	11:133792644	A/G	IGSF9B	intron	0.968	0.98521	0.0124	0.2289		5
rs35261319	11:133810127	A/G	IGSF9B	intron	0.934	0.98344	0.0280	0.5498		5
rs35571160	11:133800392	T/C	IGSF9B	intron	0.969	1.01410	0.0282	0.6203		5
rs35883589	11:133781706	T/C	IGSF9B	intron	0.932	0.94904	0.0223	0.01931		5
rs3802920	11:133787001	T/G	IGSF9B	intron	0.984	1.06099	0.0137	0.00001668		5
rs3802921	11:133786993	T/C	IGSF9B	intron	0.982	0.93857	0.0135	2.888E-6		5
rs3802922	11:133786945	A/C	IGSF9B	intron	0.971	0.94526	0.0136	0.00003665		5
rs3802923	11:133786824	C/G	IGSF9B	intron	0.960	1.03128	0.0122	0.01179		5
rs3824992	11:133786590	A/G	IGSF9B	intron	0.978	0.98442	0.0108	0.1472		5
rs4936213	11:133822555	A/G	IGSF9B	intron	0.953	0.95993	0.0114	0.0003347		5
rs4937856	11:133788407	A/C	IGSF9B	intron	0.927	0.98472	0.0110	0.1634		5
rs4937860	11:133814713	A/G	IGSF9B	intron	0.958	0.98265	0.0172	0.3081		5
rs507378	11:133817792	T/C	IGSF9B	intron	0.981	1.05686	0.0107	2.726E-7		5
rs513582	11:133781109	T/C	IGSF9B	intron	0.954	1.00481	0.0109	0.6558		4
rs59210593	11:133815350	A/G	IGSF9B	intron	0.971	0.98255	0.0143	0.2188		4
rs595986	11:133814191	A/G	IGSF9B	coding-synon	0.991	1.03066	0.0116	0.00945		5
rs626583	11:133781111	T/C	IGSF9B	intron	0.984	1.02747	0.0111	0.01448		4
rs644854	11:133809660	A/G	IGSF9B	intron	0.998	1.05443	0.0106	6.087E-7		4
rs645376	11:133809810	A/G	IGSF9B	intron	0.981	1.03179	0.0116	0.006995		4
rs663350	11:133804390	A/G	IGSF9B	intron	0.845	1.05232	0.0416	0.2195		5
rs688502	11:133817223	A/G	IGSF9B	intron	0.978	1.05559	0.0108	4.929E-7		2b
rs71477460	11:133814264	A/G	IGSF9B	intron	0.718	1.00431	0.0359	0.9044		5
rs73032062	11:133784410	A/C	IGSF9B	intron	0.982	1.05929	0.0137	0.00002725		7
rs73032070	11:133787717	A/G	IGSF9B	intron	0.950	1.05950	0.0134	0.00001672		5
rs73032079	11:133792743	A/G	IGSF9B	intron	0.933	0.91530	0.0223	0.00007359		5
rs73034256	11:133803933	C/G	IGSF9B	intron	0.883	0.96185	0.0374	0.2986		5
rs73034263	11:133808038	C/G	IGSF9B	intron	0.966	1.08296	0.0133	2.229E-9		5
rs73034287	11:133817247	C/G	IGSF9B	intron	0.975	1.00260	0.0163	0.8755		2b
rs73034295	11:133822133	A/G	IGSF9B	intron	0.961	0.91293	0.0136	2.061E-11		5
rs75059851	11:133822569	A/G	IGSF9B	intron	0.973	1.09615	0.0135	1.232E-11		5
rs75154142	11:133807999	T/C	IGSF9B	intron	0.761	0.97912	0.0572	0.7116		5
rs75502327	11:133794530	A/T	IGSF9B	intron	0.949	0.93118	0.0584	0.2218		5
rs75990128	11:133783662	C/G	IGSF9B	intron	0.949	0.96812	0.0314	0.3011		5
rs76291967	11:133784750	A/G	IGSF9B	intron	0.888	0.97765	0.0248	0.3612		5
rs77184211	11:133819814	A/G	IGSF9B	intron	0.840	1.02675	0.0456	0.5635		5
rs77597368	11:133817890	A/G	IGSF9B	intron	0.652	0.99362	0.0541	0.9052		5
rs77750788	11:133806587	A/G	IGSF9B	intron	0.763	0.92256	0.0385	0.03623		5
rs77825526	11:133821263	T/C	IGSF9B	intron	0.745	1.11238	0.0547	0.05146		5
rs77899339	11:133820816	A/C	IGSF9B	intron	0.859	1.05432	0.0424	0.2118		5
rs77973039	11:133783198	A/C	IGSF9B	intron	0.839	1.05001	0.0199	0.01411		6
rs79061073	11:133818804	T/G	IGSF9B	intron	0.964	0.97775	0.0431	0.6025		5
rs79071988	11:133813808	C/G	IGSF9B	intron	0.961	1.02737	0.0215	0.2095		5
rs79137364	11:133792242	A/T	IGSF9B	intron	0.953	0.98000	0.0277	0.4654		5
rs901035	11:133784499	A/G	IGSF9B	intron	0.987	1.06003	0.0137	0.00002177		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information