IK

Basic Information

Gene Symbol	IK
Entrez Id	3550
Position	chr5:140027384..140042065
Description	IK cytokine, down-regulator of HLA II
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs115960535	5:140038993	T/C	IK	intron	0.778	0.83870	0.0657	0.007457		7
rs145793144	5:140035006	T/C	IK	intron	0.634	1.07562	0.0550	0.1848		-
rs147908977	5:140032280	T/C	IK	intron	0.624	1.01440	0.0674	0.8314		-
rs1583005	5:140031537	A/G	IK	intron	0.998	1.04791	0.0106	0.00001001		6
rs184548056	5:140029547	A/C	IK	intron	0.746	1.05454	0.0557	0.3404		-
rs187117084	5:140029063	T/G	IK	intron,near-gene-5	0.940	1.01979	0.0596	0.7424		-
rs187579397	5:140028869	T/C	IK	intron,near-gene-5	0.601	0.89539	0.0592	0.06203		-
rs1962648	5:140030306	T/C	IK	intron	0.997	1.04812	0.0106	9.359E-6		7
rs1962649	5:140030243	A/T	IK	intron	0.984	0.95820	0.0107	0.0000629		7
rs2245640	5:140029958	A/G	IK	intron	0.998	0.95418	0.0106	9.557E-6		6
rs2245643	5:140029780	A/G	IK	intron	0.998	1.04812	0.0106	9.172E-6		6
rs2569159	5:140030710	T/C	IK	intron	0.998	1.04781	0.0106	0.00001066		6
rs2569160	5:140028774	T/C	IK	intron,near-gene-5	0.992	0.95418	0.0106	0.00001019		6
rs34282994	5:140038340	A/G	IK	missense	0.722	0.92626	0.0479	0.1097		7
rs4801	5:140041960	T/G	IK	untranslated-3	1.000	0.97443	0.0129	0.04418		6
rs6860758	5:140029373	A/G	IK	intron	0.994	1.03998	0.0125	0.001678		7
rs6888409	5:140037460	T/G	IK	intron	0.999	1.04008	0.0122	0.001282		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information