KDM3B

Basic Information

Gene Symbol	KDM3B
Entrez Id	51780
Position	chr5:137688285..137772716
Description	lysine (K)-specific demethylase 3B
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10040792	5:137759010	T/C	KDM3B	intron	1.000	1.05696	0.0108	2.638E-7		7
rs10043984	5:137712121	T/C	KDM3B	intron	1.010	1.06940	0.0120	2.176E-8		7
rs10045383	5:137689212	A/G	KDM3B	intron	1.000	0.97502	0.0110	0.02107		4
rs10055995	5:137698299	T/C	KDM3B	intron	1.000	0.94563	0.0108	2.152E-7		7
rs10058613	5:137693995	T/C	KDM3B	intron	0.863	0.93838	0.0122	1.821E-7		6
rs10073922	5:137717213	A/G	KDM3B	coding-synon	1.000	0.97463	0.0110	0.01915		7
rs10479184	5:137753917	T/C	KDM3B	intron	1.000	0.97463	0.0110	0.01896		5
rs10515499	5:137705218	A/G	KDM3B	intron	0.998	1.02276	0.0112	0.04518		2b
rs10900853	5:137696325	T/G	KDM3B	intron	1.000	1.03025	0.0108	0.005955		7
rs111290757	5:137701516	T/C	KDM3B	intron	0.931	0.94762	0.0294	0.06733		7
rs111409276	5:137693937	A/C	KDM3B	intron	0.964	0.97249	0.0317	0.3779		6
rs111426924	5:137739421	T/C	KDM3B	intron	0.962	0.97064	0.0317	0.3473		6
rs111430285	5:137758105	A/C	KDM3B	intron	0.959	0.97210	0.0318	0.3737		6
rs111686113	5:137750068	A/T	KDM3B	intron	0.961	1.02778	0.0317	0.3876		6
rs111787437	5:137688128	A/G	KDM3B	near-gene-5	0.934	1.05707	0.0513	0.2794		4
rs111830215	5:137710227	A/G	KDM3B	intron	0.945	0.96938	0.0317	0.326		7
rs112148211	5:137712143	T/C	KDM3B	intron	0.999	0.96541	0.0133	0.008129		7
rs112282425	5:137734836	C/G	KDM3B	intron	0.962	1.02809	0.0317	0.3815		6
rs112313472	5:137709370	T/C	KDM3B	intron	0.960	0.99084	0.0472	0.8457		7
rs112365199	5:137741823	A/C	KDM3B	intron	0.994	0.94734	0.0303	0.07447		6
rs112411299	5:137692109	T/C	KDM3B	intron	0.941	1.06258	0.0520	0.2432		7
rs112435592	5:137706625	T/G	KDM3B	intron	1.000	0.94554	0.0303	0.06452		7
rs112749992	5:137734710	T/C	KDM3B	intron	0.962	1.02809	0.0317	0.3818		6
rs112842625	5:137687608	A/G	KDM3B	near-gene-5	0.960	0.99084	0.0472	0.846		5
rs112929238	5:137711506	T/C	KDM3B	intron	0.963	0.97219	0.0317	0.3738		6
rs113063867	5:137743334	A/G	KDM3B	intron	0.959	0.99074	0.0472	0.8443		6
rs113218392	5:137692294	A/T	KDM3B	intron	0.964	0.97249	0.0317	0.378		7
rs113260319	5:137742713	T/C	KDM3B	intron	0.997	0.97716	0.0112	0.04001		7
rs113322698	5:137769576	A/G	KDM3B	intron	0.994	0.97804	0.0112	0.04779		6
rs113396681	5:137752962	C/G	KDM3B	intron	0.826	1.05601	0.0426	0.2014		7
rs113756860	5:137755082	T/C	KDM3B	intron	0.952	1.02276	0.0208	0.2794		7
rs113946045	5:137751134	A/G	KDM3B	intron	0.961	0.96909	0.0318	0.3227		6
rs113963180	5:137742204	T/C	KDM3B	intron	0.961	0.97297	0.0317	0.3869		7
rs114422939	5:137734853	A/G	KDM3B	intron	0.890	1.00995	0.0269	0.7133		7
rs115329371	5:137755618	T/C	KDM3B	intron	0.931	0.97239	0.0368	0.4463		6
rs115362122	5:137700616	A/G	KDM3B	intron	0.927	0.96377	0.0279	0.1853		7
rs115994579	5:137760883	T/C	KDM3B	intron	0.869	1.00361	0.0265	0.8927		5
rs116565911	5:137693409	T/C	KDM3B	intron	0.745	0.95868	0.0524	0.4209		6
rs116721257	5:137746155	A/G	KDM3B	intron	0.925	1.03925	0.0279	0.1677		6
rs116789884	5:137698085	A/T	KDM3B	intron	0.672	1.01704	0.0485	0.7275		7
rs11949335	5:137704195	A/G	KDM3B	intron	1.000	1.03583	0.0133	0.008047		7
rs11951327	5:137750528	T/C	KDM3B	intron	1.000	1.03015	0.0109	0.006238		7
rs12153795	5:137690048	A/C	KDM3B	intron	0.720	0.94422	0.0496	0.2473		5
rs12188922	5:137735245	A/T	KDM3B	intron	0.804	0.99283	0.0270	0.7895		6
rs12513428	5:137711442	T/G	KDM3B	intron	1.000	1.03583	0.0133	0.008138		7
rs12514133	5:137742465	T/C	KDM3B	intron	0.999	1.04206	0.0126	0.001085		7
rs12514669	5:137757571	C/G	KDM3B	intron	0.998	0.95945	0.0126	0.001024		5
rs12517410	5:137736611	T/G	KDM3B	intron	1.010	0.93585	0.0120	3.052E-8		6
rs12517974	5:137744369	A/C	KDM3B	intron	1.000	1.03583	0.0133	0.008139		6
rs12519732	5:137757377	A/C	KDM3B	intron	0.990	1.03583	0.0133	0.008294		6
rs12522867	5:137710013	T/G	KDM3B	intron	1.000	1.03004	0.0108	0.006297		7
rs12653150	5:137770833	A/G	KDM3B	intron	0.997	1.03583	0.0133	0.008205		6
rs12655770	5:137750058	A/G	KDM3B	intron	0.941	1.05834	0.0120	2.235E-6		6
rs12655771	5:137750065	A/C	KDM3B	intron	0.968	1.03469	0.0137	0.01312		6
rs12657315	5:137770961	T/C	KDM3B	intron	0.997	0.96551	0.0133	0.008421		5
rs12659550	5:137719722	A/G	KDM3B	intron	0.999	0.96561	0.0133	0.008553		7
rs12719513	5:137711603	T/C	KDM3B	intron	1.000	0.97463	0.0110	0.01887		6
rs13152997	5:137750633	C/G	KDM3B	intron	0.993	1.04091	0.0131	0.002159		6
rs13153017	5:137750669	A/C	KDM3B	intron	1.000	0.97463	0.0110	0.01895		6
rs13154187	5:137768385	A/C	KDM3B	intron	0.991	1.04154	0.0131	0.001818		6
rs138298543	5:137703654	A/G	KDM3B	intron	0.997	1.05929	0.0301	0.05548		-
rs139284285	5:137719717	A/G	KDM3B	intron	0.792	1.05823	0.0517	0.2741		-
rs139319182	5:137747172	A/C	KDM3B	intron	0.648	0.96079	0.0613	0.5141		-
rs140420536	5:137760209	A/G	KDM3B	intron	0.959	0.99084	0.0472	0.8455		-
rs140724411	5:137686452	T/C	KDM3B	near-gene-5	0.908	1.02235	0.0435	0.612		-
rs141558567	5:137764881	T/C	KDM3B	intron	0.922	1.03894	0.0279	0.1712		-
rs141991742	5:137755381	T/C	KDM3B	intron	0.934	1.03076	0.0141	0.03093		-
rs142240977	5:137709486	A/G	KDM3B	intron	0.687	1.01390	0.0697	0.8429		-
rs142394181	5:137693329	A/G	KDM3B	intron	0.738	0.99312	0.0585	0.9054		-
rs142429503	5:137732842	A/T	KDM3B	intron	0.775	0.90583	0.0534	0.06423		-
rs143433226	5:137766436	A/G	KDM3B	intron	1.000	1.05464	0.0304	0.08001		-
rs144037381	5:137717902	T/C	KDM3B	intron	0.699	0.98196	0.0440	0.6794		-
rs144494506	5:137724490	A/G	KDM3B	intron	1.000	0.94743	0.0306	0.07774		-
rs144555527	5:137692872	T/C	KDM3B	intron	0.633	0.99332	0.0384	0.8606		-
rs146229083	5:137751971	T/C	KDM3B	intron	0.963	1.01837	0.0512	0.7219		-
rs147868056	5:137731466	T/C	KDM3B	intron	0.853	0.98196	0.0519	0.7255		-
rs149527047	5:137739354	A/G	KDM3B	intron	0.944	0.94422	0.0299	0.05498		-
rs150859426	5:137746851	A/G	KDM3B	intron	0.798	0.94734	0.0514	0.2926		-
rs17171808	5:137699199	A/G	KDM3B	intron	1.000	1.03603	0.0133	0.007719		7
rs17171813	5:137715533	T/C	KDM3B	intron	0.922	0.91366	0.0311	0.003642		7
rs17171818	5:137725003	T/C	KDM3B	intron	1.000	0.95973	0.0126	0.0011		7
rs17171820	5:137761832	A/G	KDM3B	intron	0.998	1.04237	0.0126	0.0009999		7
rs17207562	5:137704873	T/C	KDM3B	intron	1.000	0.94611	0.0303	0.06713		7
rs17294563	5:137733891	A/G	KDM3B	coding-synon	1.000	1.00965	0.0139	0.4903		6
rs17460017	5:137717681	A/T	KDM3B	intron	1.000	1.00995	0.0138	0.4731		7
rs17538215	5:137752868	T/C	KDM3B	intron	0.997	0.97775	0.0112	0.04518		6
rs17599026	5:137763798	T/C	KDM3B	intron	0.959	0.96532	0.0188	0.06072		7
rs180965139	5:137755377	T/C	KDM3B	intron	0.668	1.04970	0.0244	0.04707		-
rs181791270	5:137723567	A/G	KDM3B	intron	0.602	1.02470	0.0343	0.4761		-
rs182429505	5:137698233	A/G	KDM3B	intron	0.609	1.02173	0.0341	0.5283		-
rs183790614	5:137701146	A/C	KDM3B	intron	0.709	0.95772	0.0740	0.5593		-
rs184504823	5:137731324	T/G	KDM3B	intron	0.621	1.06311	0.0568	0.281		-
rs185794137	5:137746124	A/G	KDM3B	intron	0.938	1.03345	0.0482	0.4953		-
rs186368614	5:137731535	A/G	KDM3B	intron	0.621	0.96117	0.0591	0.5035		-
rs186425718	5:137731885	T/C	KDM3B	intron	0.612	0.95104	0.0678	0.459		-
rs186475614	5:137725809	A/G	KDM3B	intron	0.872	1.05749	0.0631	0.3753		-
rs187010686	5:137743871	A/G	KDM3B	intron	0.820	1.01725	0.0503	0.7345		-
rs190140046	5:137723545	T/C	KDM3B	intron	0.605	0.97990	0.0319	0.5239		-
rs192131926	5:137698510	T/G	KDM3B	intron	1.000	0.94573	0.0303	0.06546		-
rs192744934	5:137744517	T/G	KDM3B	intron	0.709	1.04415	0.0740	0.5593		-
rs193083602	5:137692618	T/C	KDM3B	intron	0.844	1.04019	0.0486	0.4167		-
rs2051860	5:137728476	T/C	KDM3B	intron	0.963	0.97258	0.0317	0.3813		7
rs2240332	5:137767893	C/G	KDM3B	intron	0.995	0.97785	0.0112	0.04672		7
rs2240334	5:137763615	A/C	KDM3B	intron	1.000	1.02583	0.0110	0.01997		6
rs2269948	5:137765759	T/C	KDM3B	intron	1.000	1.05686	0.0108	2.827E-7		7
rs2269949	5:137730183	C/G	KDM3B	intron	1.000	0.96541	0.0133	0.008048		7
rs2269950	5:137730062	A/G	KDM3B	intron	1.000	1.03645	0.0133	0.007194		6
rs2269951	5:137728774	A/G	KDM3B	intron	1.000	1.02932	0.0108	0.007633		7
rs2286057	5:137766440	A/G	KDM3B	intron	0.960	1.05686	0.0109	3.886E-7		6
rs2286058	5:137766366	A/G	KDM3B	intron	0.998	0.96474	0.0133	0.007039		6
rs28434349	5:137755357	A/T	KDM3B	intron	0.800	0.95916	0.0129	0.001217		6
rs28786717	5:137736471	A/G	KDM3B	intron	1.010	1.06887	0.0120	2.706E-8		7
rs34574126	5:137723640	T/G	KDM3B	intron	0.860	0.98128	0.0238	0.4253		6
rs35131895	5:137748877	A/G	KDM3B	intron	1.010	0.93529	0.0120	2.402E-8		7
rs35231526	5:137745843	A/G	KDM3B	intron	0.994	1.04112	0.0131	0.002031		6
rs35486585	5:137758795	A/G	KDM3B	intron	0.959	0.96493	0.0188	0.05802		7
rs35635987	5:137690876	A/C	KDM3B	intron	0.997	1.02224	0.0112	0.04992		4
rs35897885	5:137750106	A/G	KDM3B	intron	0.840	1.10307	0.0419	0.01937		6
rs3798149	5:137722822	T/C	KDM3B	intron	0.999	0.93594	0.0120	3.254E-8		7
rs3798150	5:137726454	T/C	KDM3B	intron	1.000	1.00955	0.0138	0.4939		7
rs3815212	5:137761555	T/C	KDM3B	intron	0.998	1.04237	0.0126	0.0009893		7
rs3822837	5:137718687	T/C	KDM3B	intron	1.000	1.03583	0.0133	0.008181		6
rs41300795	5:137760048	A/G	KDM3B	intron	1.000	0.94800	0.0304	0.0786		7
rs4639219	5:137699620	A/G	KDM3B	intron	0.991	0.97590	0.0110	0.02697		6
rs4835677	5:137700251	A/T	KDM3B	intron	0.998	1.02255	0.0112	0.04668		7
rs4835678	5:137708434	T/C	KDM3B	coding-synon	1.000	0.94601	0.0108	2.541E-7		6
rs4835679	5:137708815	A/G	KDM3B	intron	0.949	0.95686	0.0152	0.003748		5
rs4835680	5:137735754	A/T	KDM3B	intron	1.010	1.06897	0.0120	2.545E-8		7
rs4835784	5:137730794	T/G	KDM3B	intron	0.993	1.02194	0.0113	0.05455		5
rs4835786	5:137732445	A/G	KDM3B	intron	1.000	1.02973	0.0108	0.006805		6
rs4835788	5:137735916	T/G	KDM3B	intron	0.949	0.96609	0.0139	0.01283		6
rs4835789	5:137739040	A/T	KDM3B	intron	1.000	1.03645	0.0133	0.007081		6
rs4835790	5:137744392	T/C	KDM3B	intron	1.010	1.06919	0.0120	2.333E-8		6
rs4835791	5:137745700	T/C	KDM3B	intron	1.010	1.06919	0.0120	2.319E-8		7
rs59023560	5:137736998	A/T	KDM3B	intron	1.000	0.96551	0.0133	0.008219		7
rs59846039	5:137731812	T/C	KDM3B	intron	0.997	1.02973	0.0109	0.007053		6
rs60271703	5:137758927	T/G	KDM3B	intron	1.000	1.03614	0.0133	0.007566		7
rs61315180	5:137749294	A/G	KDM3B	intron	1.000	1.03593	0.0133	0.007873		6
rs61749634	5:137766066	A/G	KDM3B	coding-synon	1.000	0.94819	0.0304	0.08		7
rs62380932	5:137687837	A/G	KDM3B	near-gene-5	0.999	0.99005	0.0139	0.4711		5
rs62380933	5:137691761	T/C	KDM3B	intron	1.000	0.99005	0.0138	0.4685		7
rs62380935	5:137723585	A/G	KDM3B	intron	0.870	0.99541	0.0147	0.7535		7
rs62380939	5:137731858	C/G	KDM3B	intron	0.986	1.00944	0.0138	0.497		6
rs62380940	5:137731986	A/G	KDM3B	intron	0.993	0.96996	0.0109	0.005252		7
rs62380941	5:137736941	A/C	KDM3B	intron	0.953	1.11483	0.0335	0.001164		7
rs62380954	5:137740141	A/T	KDM3B	intron	0.991	1.00864	0.0139	0.5348		7
rs62380956	5:137743298	T/C	KDM3B	intron	1.000	1.02984	0.0108	0.006769		7
rs62380957	5:137744318	T/C	KDM3B	intron	0.938	1.04823	0.0221	0.03307		7
rs62382361	5:137769795	T/C	KDM3B	intron	0.960	1.11751	0.0318	0.0004769		7
rs6596432	5:137713761	A/G	KDM3B	intron	1.000	0.94450	0.0303	0.05953		7
rs6859449	5:137723582	A/T	KDM3B	intron	0.901	1.01593	0.0140	0.259		7
rs6859891	5:137723587	A/G	KDM3B	intron	0.853	0.98787	0.0141	0.3891		7
rs6875772	5:137692761	T/C	KDM3B	intron	0.999	1.01005	0.0139	0.4725		5
rs6886388	5:137733423	A/G	KDM3B	intron	0.991	0.97873	0.0112	0.05614		7
rs6894775	5:137706422	T/C	KDM3B	intron	1.000	1.03603	0.0133	0.007771		5
rs6894833	5:137692821	A/G	KDM3B	intron	1.000	1.03015	0.0108	0.006113		5
rs6897871	5:137758232	A/G	KDM3B	intron	0.999	0.96474	0.0133	0.007004		7
rs72803845	5:137691417	A/G	KDM3B	intron	0.999	1.01005	0.0139	0.4722		5
rs72803856	5:137712520	C/G	KDM3B	intron	0.945	1.10418	0.0523	0.05784		5
rs72803865	5:137729679	A/G	KDM3B	intron	1.000	0.94667	0.0303	0.07093		7
rs72803873	5:137740622	T/C	KDM3B	intron	0.986	1.06290	0.0139	0.00001206		7
rs72803879	5:137752028	T/C	KDM3B	intron	0.944	1.10043	0.0468	0.04079		6
rs72803881	5:137752788	A/G	KDM3B	intron	1.000	0.94743	0.0306	0.07738		6
rs72803883	5:137755903	C/G	KDM3B	intron	1.000	0.94791	0.0304	0.07804		7
rs72803892	5:137764311	A/G	KDM3B	intron	0.942	0.91046	0.0468	0.04486		7
rs72803894	5:137764349	T/C	KDM3B	intron	0.655	0.98255	0.0489	0.7196		6
rs72803896	5:137768477	A/G	KDM3B	intron	1.000	0.94847	0.0304	0.08134		6
rs73255864	5:137701504	A/G	KDM3B	intron	1.000	1.03593	0.0133	0.007874		7
rs73257854	5:137734666	A/C	KDM3B	intron	0.994	0.96715	0.0133	0.01196		7
rs73257862	5:137740795	A/C	KDM3B	intron	1.000	0.96541	0.0133	0.008134		7
rs73259805	5:137768494	T/C	KDM3B	intron	0.957	0.95916	0.0133	0.00174		6
rs75313335	5:137751128	A/T	KDM3B	intron	1.000	1.03572	0.0133	0.008217		7
rs76113487	5:137735921	T/G	KDM3B	intron	0.872	0.93932	0.0490	0.2014		6
rs76256601	5:137761774	A/G	KDM3B	intron	0.745	0.94743	0.0509	0.2884		7
rs7702238	5:137741343	A/C	KDM3B	intron	0.995	0.96416	0.0133	0.00588		6
rs7719002	5:137707479	T/C	KDM3B	intron	1.000	0.94592	0.0303	0.06657		6
rs7725416	5:137754180	A/T	KDM3B	intron	1.000	0.94620	0.0108	2.87E-7		7
rs77413831	5:137765663	T/C	KDM3B	intron	0.952	1.02286	0.0208	0.2775		5
rs77588725	5:137746094	T/C	KDM3B	intron	0.860	0.99501	0.0263	0.8479		6
rs77747111	5:137723942	T/G	KDM3B	intron	0.727	1.05117	0.0501	0.3192		6
rs78119105	5:137700951	A/C	KDM3B	intron	0.963	0.97229	0.0317	0.3756		6
rs78260052	5:137687201	A/G	KDM3B	near-gene-5	0.914	0.98807	0.0280	0.6691		5
rs78530883	5:137705630	T/C	KDM3B	intron	0.720	1.07929	0.0427	0.07426		2b
rs78589002	5:137760900	C/G	KDM3B	intron	1.000	0.94800	0.0304	0.07883		5
rs78702109	5:137705715	A/G	KDM3B	intron	0.965	1.01918	0.0169	0.2599		5
rs79806241	5:137700537	T/C	KDM3B	intron	0.963	0.97229	0.0317	0.3757		5
rs79976632	5:137772334	A/G	KDM3B	untranslated-3	0.978	0.98147	0.0165	0.2577		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information