KIF2A

Basic Information

Gene Symbol	KIF2A
Entrez Id	3796
Position	chr5:61601989..61682210
Description	kinesin heavy chain member 2A
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10044843	5:61606371	A/G	KIF2A	intron	0.999	1.00501	0.0111	0.6535		4
rs10062264	5:61655822	T/G	KIF2A	intron	0.997	1.02614	0.0140	0.06488		6
rs10461472	5:61639876	A/T	KIF2A	intron	0.997	1.02276	0.0107	0.03518		7
rs10471545	5:61607268	A/G	KIF2A	intron	1.000	0.99501	0.0111	0.6512		7
rs10471546	5:61615734	A/G	KIF2A	intron	0.993	0.97804	0.0107	0.03785		6
rs1085103	5:61675357	T/C	KIF2A	intron	0.993	0.99134	0.0121	0.4704		6
rs10939936	5:61638835	A/T	KIF2A	intron	1.000	1.00783	0.0180	0.6635		6
rs10939937	5:61646259	T/C	KIF2A	intron	0.996	1.02593	0.0107	0.01673		7
rs10939938	5:61648728	A/G	KIF2A	intron	1.000	1.00763	0.0180	0.6732		6
rs10939939	5:61648738	T/G	KIF2A	intron	0.998	1.01106	0.0120	0.3602		7
rs111530991	5:61614778	T/C	KIF2A	intron	0.977	0.94233	0.0391	0.129		7
rs112128208	5:61635858	T/C	KIF2A	intron	0.984	0.96831	0.0218	0.1403		7
rs112522424	5:61620274	C/G	KIF2A	intron	0.977	1.06120	0.0391	0.1289		7
rs112573787	5:61651491	A/T	KIF2A	intron	0.979	0.94224	0.0392	0.1291		7
rs112706657	5:61644657	C/G	KIF2A	intron	0.932	0.93249	0.0472	0.1391		5
rs112949978	5:61619784	T/C	KIF2A	intron	0.979	0.94214	0.0392	0.1276		7
rs113880396	5:61607999	T/C	KIF2A	intron	0.933	1.06695	0.0447	0.1476		5
rs115011828	5:61642601	T/C	KIF2A	intron	0.885	0.95964	0.0343	0.2295		5
rs115247541	5:61671019	A/T	KIF2A	intron	0.698	0.98039	0.0541	0.7148		6
rs115555872	5:61602568	C/G	KIF2A	intron	0.985	0.97045	0.0218	0.1685		4
rs115909564	5:61613291	T/C	KIF2A	intron	0.744	1.01867	0.0475	0.697		5
rs116609763	5:61605284	T/G	KIF2A	intron	0.865	1.00090	0.0322	0.9765		7
rs116771537	5:61647138	T/C	KIF2A	intron	0.932	0.93249	0.0472	0.1389		6
rs11952777	5:61619065	A/G	KIF2A	intron	0.996	0.98965	0.0121	0.3907		7
rs11957789	5:61640131	T/C	KIF2A	intron	1.000	0.98965	0.0121	0.3897		7
rs12153750	5:61648053	A/G	KIF2A	intron	1.000	1.00783	0.0180	0.6634		7
rs12187566	5:61647233	A/G	KIF2A	intron	0.994	1.02655	0.0140	0.06152		7
rs12515967	5:61612107	T/C	KIF2A	intron	0.997	1.02286	0.0107	0.0344		2b
rs12519766	5:61662429	T/C	KIF2A	intron	1.000	1.00793	0.0180	0.6596		6
rs12655562	5:61608074	A/G	KIF2A	intron	1.000	1.06216	0.0197	0.002184		5
rs12658601	5:61640941	A/G	KIF2A	intron	1.000	0.99054	0.0121	0.4324		7
rs12659777	5:61629159	T/C	KIF2A	intron	1.000	1.00955	0.0121	0.4349		5
rs12696988	5:61600395	A/C	KIF2A	near-gene-5	1.000	0.98906	0.0180	0.5401		5
rs12696990	5:61618561	A/G	KIF2A	intron	0.994	1.02204	0.0107	0.04107		2b
rs12696991	5:61653244	C/G	KIF2A	intron	1.000	1.02614	0.0140	0.06537		6
rs1308621	5:61666489	T/C	KIF2A	intron	0.820	1.13315	0.0310	0.00005433		6
rs1309156	5:61665955	A/G	KIF2A	intron	0.996	0.97873	0.0107	0.04457		7
rs13155253	5:61629876	T/C	KIF2A	intron	1.010	1.06194	0.0197	0.002272		6
rs13155700	5:61609248	T/C	KIF2A	intron	0.992	1.02276	0.0107	0.03538		7
rs13156695	5:61617594	T/C	KIF2A	intron	1.010	1.06216	0.0197	0.002162		7
rs13159750	5:61600316	T/C	KIF2A	near-gene-5	0.997	0.99491	0.0111	0.6483		5
rs13174779	5:61675396	C/G	KIF2A	intron	0.993	0.93923	0.0202	0.001904		7
rs13178729	5:61600845	A/G	KIF2A	near-gene-5	0.992	0.93885	0.0197	0.001353		7
rs13182011	5:61606516	C/G	KIF2A	intron	0.765	1.05211	0.0277	0.06623		3a
rs13361143	5:61600367	C/G	KIF2A	near-gene-5	0.994	0.97716	0.0107	0.03064		5
rs13361219	5:61600714	C/G	KIF2A	near-gene-5	0.990	1.03056	0.0106	0.004468		6
rs139780953	5:61620129	T/C	KIF2A	intron	0.884	0.95954	0.0343	0.2285		-
rs140791348	5:61630014	T/C	KIF2A	intron	0.879	0.90132	0.0509	0.04119		-
rs140857377	5:61634396	C/G	KIF2A	intron	0.973	1.09352	0.0658	0.1739		-
rs141968809	5:61602050	T/C	KIF2A	untranslated-5	0.670	0.97054	0.0241	0.2149		-
rs142734862	5:61608255	A/C	KIF2A	intron	0.932	0.96002	0.0496	0.4114		-
rs142844402	5:61625918	T/C	KIF2A	intron	0.772	1.05940	0.0617	0.3504		-
rs144259032	5:61660687	T/C	KIF2A	intron	0.964	0.99054	0.0271	0.7253		-
rs145832234	5:61616302	C/G	KIF2A	intron	0.972	1.09374	0.0658	0.1735		-
rs147401229	5:61613970	T/C	KIF2A	intron	0.973	0.96638	0.0217	0.1154		-
rs149886746	5:61666343	C/G	KIF2A	intron	0.776	1.01379	0.0320	0.6689		-
rs150613071	5:61640602	T/C	KIF2A	intron	0.944	0.99352	0.0329	0.8422		-
rs152189	5:61680448	T/C	KIF2A	intron	1.000	1.00934	0.0121	0.4438		5
rs153867	5:61679612	T/C	KIF2A	intron	0.887	1.01491	0.0263	0.5721		7
rs16875037	5:61668150	A/C	KIF2A	intron	1.000	1.06152	0.0197	0.002404		6
rs16890618	5:61607095	C/G	KIF2A	intron	1.000	1.06396	0.0197	0.001651		7
rs16890622	5:61611570	T/C	KIF2A	intron	0.996	0.97726	0.0107	0.03167		4
rs16890628	5:61612281	A/T	KIF2A	intron	1.000	0.94148	0.0197	0.002171		5
rs16890634	5:61618595	A/C	KIF2A	intron	1.000	1.06428	0.0197	0.001538		4
rs16890651	5:61629539	A/G	KIF2A	intron	1.010	1.06173	0.0197	0.002338		3a
rs16890656	5:61642831	A/G	KIF2A	intron	1.000	0.99263	0.0180	0.6813		4
rs16890659	5:61647274	A/G	KIF2A	intron	1.000	0.99045	0.0121	0.4297		6
rs17381617	5:61674012	T/C	KIF2A	intron	0.983	0.96831	0.0218	0.1392		7
rs181029087	5:61663238	T/C	KIF2A	intron	0.792	1.01440	0.0502	0.7753		-
rs181824384	5:61602038	A/C	KIF2A	untranslated-5	0.804	1.04645	0.0361	0.2088		-
rs182410875	5:61628250	T/C	KIF2A	intron	0.972	1.09363	0.0658	0.1739		-
rs183877313	5:61627164	A/G	KIF2A	intron	0.629	0.95228	0.0601	0.416		-
rs187944758	5:61611468	C/G	KIF2A	intron	0.883	0.95782	0.0584	0.4611		-
rs188582630	5:61646645	A/T	KIF2A	intron	0.698	1.06343	0.0507	0.2249		-
rs2034240	5:61635205	T/C	KIF2A	intron	0.995	0.97746	0.0107	0.03281		7
rs2063256	5:61618703	A/C	KIF2A	intron	0.880	1.01450	0.0168	0.392		5
rs2289883	5:61650843	A/G	KIF2A	intron	0.997	0.97785	0.0107	0.03572		6
rs2344396	5:61605567	A/G	KIF2A	intron	1.000	0.99491	0.0111	0.642		7
rs247218	5:61669276	A/G	KIF2A	intron	0.993	1.02112	0.0107	0.05074		6
rs247219	5:61670331	T/C	KIF2A	intron	1.000	1.00914	0.0121	0.4497		6
rs247220	5:61670573	A/G	KIF2A	intron	0.988	1.02102	0.0107	0.05216		7
rs247221	5:61665316	C/G	KIF2A	intron	0.996	0.97834	0.0107	0.04051		6
rs247222	5:61664039	A/G	KIF2A	intron	0.997	0.97775	0.0107	0.03527		7
rs247223	5:61663931	A/G	KIF2A	intron	0.997	1.02255	0.0107	0.03692		7
rs247227	5:61660355	T/C	KIF2A	intron	0.990	1.03015	0.0106	0.0051		7
rs247253	5:61676902	T/G	KIF2A	intron	0.996	0.97844	0.0107	0.04127		6
rs247254	5:61676911	T/G	KIF2A	intron	0.989	1.02984	0.0106	0.005537		7
rs247255	5:61680787	T/C	KIF2A	intron	0.995	1.02204	0.0107	0.04158		7
rs247265	5:61657228	T/C	KIF2A	intron	0.997	1.02255	0.0107	0.03639		7
rs247267	5:61657574	T/C	KIF2A	intron	0.997	1.02265	0.0107	0.03587		6
rs247268	5:61657586	T/C	KIF2A	intron	0.993	1.02255	0.0107	0.03717		7
rs247269	5:61657747	A/G	KIF2A	intron	0.997	1.02265	0.0107	0.03635		6
rs247270	5:61657957	A/G	KIF2A	intron	0.996	1.02224	0.0107	0.03969		6
rs247271	5:61658648	A/T	KIF2A	intron	1.000	0.99045	0.0121	0.4286		6
rs247273	5:61652985	A/G	KIF2A	intron	0.997	0.97804	0.0107	0.03761		7
rs264521	5:61632175	A/T	KIF2A	intron	0.997	1.02265	0.0107	0.03601		6
rs264522	5:61632104	C/G	KIF2A	intron	1.000	1.00753	0.0180	0.6757		7
rs264528	5:61628210	T/G	KIF2A	intron	0.997	0.97795	0.0107	0.03678		7
rs264532	5:61624327	T/C	KIF2A	intron	1.000	1.02603	0.0140	0.06677		6
rs28720674	5:61648323	A/G	KIF2A	intron	1.000	0.99243	0.0180	0.6735		5
rs3213940	5:61642937	T/C	KIF2A	intron	1.000	1.00975	0.0121	0.4232		7
rs34220654	5:61653414	A/G	KIF2A	intron	1.000	1.06141	0.0197	0.002436		6
rs34596001	5:61661934	A/G	KIF2A	intron	1.000	1.06152	0.0197	0.002425		7
rs35238667	5:61680407	C/G	KIF2A	intron	1.000	0.94195	0.0197	0.002404		5
rs35699711	5:61645870	A/G	KIF2A	intron	1.000	1.06173	0.0197	0.002345		6
rs35808056	5:61600006	A/C	KIF2A	near-gene-5	1.000	1.06407	0.0197	0.001612		6
rs35815430	5:61663971	T/G	KIF2A	intron	0.943	0.94035	0.0226	0.006597		6
rs3822485	5:61605063	A/C	KIF2A	intron	0.996	1.02347	0.0107	0.0301		5
rs4289514	5:61675875	T/C	KIF2A	intron	0.994	0.93904	0.0202	0.001833		7
rs4290970	5:61602661	T/C	KIF2A	intron	0.967	0.99621	0.0111	0.7313		4
rs4441833	5:61604456	T/C	KIF2A	intron	0.994	0.97756	0.0107	0.03408		3a
rs4700006	5:61604204	A/C	KIF2A	intron,untranslated-5	0.996	1.02327	0.0107	0.03111		5
rs4700009	5:61618060	T/C	KIF2A	intron	0.997	0.97765	0.0107	0.03465		5
rs4700491	5:61649403	T/G	KIF2A	intron	1.000	0.99203	0.0180	0.6572		6
rs57835221	5:61623609	A/G	KIF2A	intron	1.000	0.99054	0.0121	0.4305		5
rs58057332	5:61640348	T/C	KIF2A	intron	1.000	1.00955	0.0121	0.4326		7
rs58266302	5:61624598	T/C	KIF2A	intron	1.000	0.99054	0.0121	0.4321		7
rs60468842	5:61620772	A/G	KIF2A	intron	1.000	1.00965	0.0121	0.4272		6
rs61388866	5:61645172	T/C	KIF2A	intron	0.975	1.03832	0.0218	0.08385		6
rs62365320	5:61607704	A/G	KIF2A	intron	0.675	1.00874	0.0521	0.8667		5
rs62374960	5:61619222	T/C	KIF2A	intron	1.000	0.98955	0.0121	0.387		6
rs62374961	5:61619251	A/G	KIF2A	intron	0.998	0.99025	0.0121	0.4202		7
rs6449596	5:61628497	T/G	KIF2A	intron	1.000	0.99054	0.0121	0.435		7
rs6449597	5:61633970	A/G	KIF2A	intron	1.000	0.99074	0.0121	0.4408		5
rs6863617	5:61661618	C/G	KIF2A	intron	1.000	1.00793	0.0180	0.6596		6
rs6884054	5:61612563	C/G	KIF2A	intron	1.000	0.99124	0.0180	0.6262		6
rs6886044	5:61649347	A/T	KIF2A	intron	1.000	0.99025	0.0121	0.418		7
rs71617429	5:61602684	A/C	KIF2A	intron	0.883	0.95285	0.0207	0.01977		2b
rs72767088	5:61630874	A/G	KIF2A	intron	0.684	1.00904	0.0428	0.8341		7
rs73104056	5:61669490	T/C	KIF2A	intron	1.000	0.99203	0.0181	0.6583		5
rs73104058	5:61669503	T/C	KIF2A	intron	1.000	0.99203	0.0181	0.6583		5
rs73760588	5:61638943	T/C	KIF2A	intron	0.982	1.03386	0.0219	0.1277		7
rs73760590	5:61641984	T/C	KIF2A	intron	0.984	0.96831	0.0218	0.1403		6
rs74288901	5:61660306	T/G	KIF2A	intron	1.000	0.94205	0.0197	0.002419		7
rs74878665	5:61624925	T/C	KIF2A	intron	0.767	1.01572	0.0303	0.607		5
rs75304142	5:61640163	A/G	KIF2A	intron	0.982	0.96725	0.0219	0.1277		7
rs75882948	5:61661585	A/G	KIF2A	intron	0.772	1.01471	0.0303	0.6311		7
rs75974437	5:61644913	T/C	KIF2A	intron	1.000	0.98236	0.0188	0.3454		6
rs76412137	5:61660208	T/C	KIF2A	intron	0.785	1.05950	0.0271	0.03273		7
rs76817634	5:61635370	A/G	KIF2A	intron	0.962	0.99442	0.0193	0.7702		7
rs76854047	5:61630659	A/G	KIF2A	intron	0.767	0.98452	0.0303	0.6065		7
rs77769056	5:61617488	T/C	KIF2A	intron	0.984	0.96909	0.0218	0.1496		7
rs78015367	5:61608981	T/C	KIF2A	intron	0.767	0.98423	0.0303	0.5986		6
rs78042189	5:61643357	C/G	KIF2A	intron	0.932	0.93249	0.0472	0.1391		5
rs79314976	5:61619971	A/G	KIF2A	intron	0.839	0.95820	0.0149	0.004164		7
rs79433549	5:61634643	A/G	KIF2A	intron	0.663	1.02685	0.0552	0.6317		6
rs812510	5:61672614	A/G	KIF2A	intron	0.823	1.13894	0.0308	0.00002431		7
rs9291758	5:61622190	T/C	KIF2A	intron	0.997	0.97756	0.0107	0.03375		7
rs9291759	5:61622716	C/G	KIF2A	intron	1.000	0.99183	0.0180	0.6477		5
rs959899	5:61651248	T/C	KIF2A	intron	0.995	1.02265	0.0107	0.03647		7
rs9968583	5:61609852	T/C	KIF2A	intron	0.983	1.02235	0.0107	0.03918		6
rs9968586	5:61610255	T/C	KIF2A	intron	0.988	1.02265	0.0107	0.03656		3a
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information