LINC00634

Basic Information

Gene Symbol	LINC00634
Entrez Id	339674
Position	chr22:42348191..42354946
Description	long intergenic non-protein coding RNA 634
Gene type	ncRNA

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs113430050	22:42351054	I5/D	LINC00634	intron	0.933	0.93491	0.0183	0.0002351		-
rs11913578	22:42347391	A/C	LINC00634	near-gene-5	0.992	1.00864	0.0129	0.5071		4
rs11913631	22:42347371	T/G	LINC00634	near-gene-5	0.992	0.99124	0.0129	0.4953		2b
rs12158579	22:42351289	T/C	LINC00634	intron	0.981	0.99193	0.0130	0.5356		7
rs12167978	22:42346475	A/G	LINC00634	near-gene-5	0.992	0.99144	0.0129	0.5075		7
rs139673891	22:42350090	A/G	LINC00634	intron	0.745	0.95409	0.0301	0.1192		-
rs145793708	22:42351538	T/C	LINC00634	intron	0.805	0.92008	0.0358	0.02016		-
rs145874284	22:42351805	A/G	LINC00634	intron	0.775	0.95715	0.0209	0.03618		-
rs150324453	22:42351381	T/C	LINC00634	intron	0.932	1.00050	0.0504	0.9915		-
rs181281616	22:42352983	T/C	LINC00634	intron	0.947	1.00965	0.0513	0.8521		-
rs189341075	22:42354387	A/G	LINC00634	ncRNA	0.695	0.92496	0.0523	0.1357		-
rs2157591	22:42348094	C/G	LINC00634	near-gene-5	0.994	0.93361	0.0169	0.0000486		1b
rs2187959	22:42347844	T/G	LINC00634	near-gene-5	0.991	1.03686	0.0114	0.001472		7
rs2187960	22:42348355	T/C	LINC00634	ncRNA	0.901	0.93988	0.0231	0.007432		4
rs28722907	22:42348062	A/G	LINC00634	near-gene-5	0.918	1.03707	0.0189	0.05434		2b
rs4822069	22:42351481	T/C	LINC00634	intron	0.983	1.04613	0.0109	0.00003272		5
rs4822070	22:42352081	A/G	LINC00634	intron	0.947	1.06567	0.0166	0.0001237		7
rs4822071	22:42353064	T/C	LINC00634	intron	0.986	1.03583	0.0114	0.002009		6
rs58302269	22:42351309	A/G	LINC00634	intron	0.990	0.99084	0.0130	0.4786		6
rs62240993	22:42346728	A/G	LINC00634	near-gene-5	0.920	0.99471	0.0212	0.8035		7
rs62240996	22:42354389	A/C	LINC00634	ncRNA	0.918	1.03035	0.0115	0.009158		5
rs62240997	22:42354567	T/G	LINC00634	ncRNA	0.990	1.00965	0.0130	0.4603		5
rs62240998	22:42354701	A/T	LINC00634	ncRNA	0.989	0.96512	0.0114	0.001842		5
rs6519296	22:42348602	C/G	LINC00634	intron	0.990	0.96435	0.0114	0.001455		7
rs6519297	22:42349847	A/G	LINC00634	intron	0.994	0.93969	0.0168	0.0002164		7
rs73165163	22:42354642	A/T	LINC00634	ncRNA	0.964	0.94186	0.0191	0.001659		5
rs73417007	22:42353408	A/G	LINC00634	intron	0.993	1.06855	0.0170	0.0001004		7
rs9680671	22:42351477	T/C	LINC00634	intron	0.981	1.00783	0.0129	0.5483		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information