LINC01184

Basic Information

Gene Symbol	LINC01184
Entrez Id	644873
Position	chr5:127357243..127418766
Description	long intergenic non-protein coding RNA 1184
Gene type	ncRNA

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10045113	5:127386631	T/C	LINC01184	intron	0.993	1.03572	0.0124	0.004549		7
rs10045307	5:127411454	C/G	LINC01184	intron	0.978	0.96667	0.0125	0.006509		6
rs10063647	5:127371588	A/G	LINC01184	intron	0.996	0.96957	0.0107	0.003742		3a
rs10064098	5:127390739	T/G	LINC01184	intron	0.947	0.96377	0.0132	0.005151		7
rs10064357	5:127417272	A/G	LINC01184	intron	0.990	0.96735	0.0127	0.008697		4
rs1012851	5:127360241	T/C	LINC01184	intron	0.993	0.96570	0.0124	0.004693		7
rs1036171	5:127402798	T/C	LINC01184	intron	0.989	1.03655	0.0124	0.003739		6
rs10455050	5:127400990	T/G	LINC01184	intron	0.937	1.04488	0.0214	0.04079		7
rs10519971	5:127379216	T/C	LINC01184	intron	0.993	1.01704	0.0172	0.3264		7
rs111650330	5:127398160	A/G	LINC01184	intron	0.753	1.00692	0.0505	0.8914		5
rs113489862	5:127362206	T/C	LINC01184	intron	0.705	0.99601	0.0384	0.9167		7
rs114481301	5:127391259	C/G	LINC01184	intron	0.750	1.03190	0.0545	0.5646		6
rs114537516	5:127395713	T/C	LINC01184	intron	0.934	1.02655	0.0213	0.2183		6
rs115031465	5:127390294	A/G	LINC01184	intron	0.929	0.94167	0.0581	0.3011		7
rs115490928	5:127365631	T/C	LINC01184	intron	0.744	1.00210	0.0554	0.9692		7
rs115523726	5:127412113	T/C	LINC01184	intron	0.909	1.01207	0.0332	0.7187		6
rs115651588	5:127360851	A/C	LINC01184	intron	0.839	1.05887	0.0403	0.1558		7
rs116202081	5:127374376	A/G	LINC01184	intron	0.935	0.96031	0.0389	0.2971		4
rs12188497	5:127362543	T/C	LINC01184	intron	0.948	0.96793	0.0222	0.143		7
rs1234527	5:127384861	T/C	LINC01184	intron	0.953	0.96938	0.0109	0.004202		7
rs13169878	5:127338216	A/G	LINC01184	ncRNA	0.959	1.00602	0.0108	0.5796		5
rs13358455	5:127365786	T/C	LINC01184	intron	0.989	1.03479	0.0124	0.005749		7
rs139897485	5:127380681	A/G	LINC01184	intron	0.763	1.00552	0.0519	0.9163		-
rs140849544	5:127400628	T/C	LINC01184	intron	0.928	1.06184	0.0581	0.3012		-
rs141253840	5:127393811	A/C	LINC01184	intron	0.712	0.92608	0.0557	0.1683		-
rs144294672	5:127359095	A/C	LINC01184	ncRNA	0.687	1.11751	0.0623	0.07464		-
rs144469819	5:127407569	T/C	LINC01184	intron	0.904	1.09308	0.0521	0.08766		-
rs145136836	5:127406889	T/G	LINC01184	intron	0.772	0.96252	0.0642	0.5515		-
rs146466483	5:127379814	T/C	LINC01184	intron	0.871	0.93819	0.0358	0.07518		-
rs146579248	5:127382302	T/C	LINC01184	intron	0.928	0.98946	0.0333	0.7499		-
rs147719470	5:127382121	A/C	LINC01184	intron	0.966	1.02984	0.0203	0.1471		-
rs148304736	5:127416972	A/C	LINC01184	intron	0.924	1.03645	0.0382	0.3483		-
rs148615270	5:127339900	T/C	LINC01184	near-gene-5	0.787	1.00652	0.0396	0.8701		-
rs151161199	5:127362018	T/G	LINC01184	intron	0.833	0.99025	0.0600	0.8708		-
rs17164395	5:127395526	T/C	LINC01184	intron	0.992	0.98295	0.0173	0.3189		5
rs17164427	5:127361736	C/G	LINC01184	intron	0.989	0.96647	0.0124	0.005915		7
rs17607283	5:127396300	T/C	LINC01184	intron	0.851	0.98423	0.0235	0.4993		6
rs17764730	5:127357526	T/C	LINC01184	ncRNA	1.000	1.00874	0.0123	0.4803		6
rs180910137	5:127364369	T/C	LINC01184	intron	0.973	1.01248	0.0174	0.4757		-
rs182316593	5:127408615	A/G	LINC01184	intron	0.749	1.00733	0.0497	0.8835		-
rs182561384	5:127365536	A/G	LINC01184	intron	0.612	0.98452	0.0297	0.6005		-
rs183065643	5:127340910	T/C	LINC01184	near-gene-5	0.818	0.97064	0.0473	0.5288		-
rs189045605	5:127385129	T/C	LINC01184	intron	0.847	1.06748	0.0568	0.25		-
rs190872570	5:127384415	A/G	LINC01184	intron	0.829	0.92876	0.0528	0.1619		-
rs1985268	5:127375931	T/C	LINC01184	intron	0.993	0.96570	0.0123	0.004661		6
rs2250127	5:127388844	A/G	LINC01184	intron	0.995	1.00682	0.0123	0.5806		6
rs2286386	5:127337711	T/C	LINC01184	near-gene-3	0.964	0.99511	0.0303	0.8719		7
rs34576922	5:127364103	C/G	LINC01184	intron	0.999	0.99173	0.0123	0.4981		6
rs35673135	5:127341494	T/C	LINC01184	near-gene-5	0.884	0.99293	0.0113	0.5275		7
rs35915226	5:127374264	T/G	LINC01184	intron	0.908	0.99094	0.0244	0.709		5
rs4835938	5:127377031	C/G	LINC01184	intron	0.989	0.95945	0.0158	0.008677		7
rs4835939	5:127389158	A/C	LINC01184	intron	0.993	1.04112	0.0157	0.01023		5
rs4835940	5:127406596	A/G	LINC01184	intron	0.988	0.96532	0.0124	0.004341		7
rs4836356	5:127338410	C/G	LINC01184	ncRNA	0.914	0.98216	0.0295	0.5421		5
rs4836358	5:127376869	A/G	LINC01184	intron	0.993	0.96541	0.0123	0.004367		4
rs4836359	5:127385518	A/T	LINC01184	intron	0.992	1.03562	0.0124	0.004611		7
rs58395264	5:127368393	T/C	LINC01184	intron	0.996	1.04269	0.0155	0.007006		7
rs58433932	5:127364362	C/G	LINC01184	intron	0.965	1.03479	0.0128	0.007559		6
rs62373686	5:127340260	A/C	LINC01184	near-gene-5	0.873	0.96860	0.0306	0.2967		6
rs62373694	5:127378876	T/C	LINC01184	intron	0.996	0.96079	0.0156	0.0104		7
rs62373701	5:127416294	T/C	LINC01184	intron	0.986	1.03552	0.0124	0.004874		4
rs6595798	5:127384289	T/C	LINC01184	intron	0.993	0.96551	0.0124	0.004502		6
rs6595799	5:127408683	T/C	LINC01184	intron	0.942	0.99253	0.0117	0.5221		7
rs6595800	5:127411647	T/C	LINC01184	intron	0.987	1.03552	0.0124	0.00486		7
rs6860245	5:127367998	C/G	LINC01184	intron	0.999	1.00793	0.0123	0.5217		7
rs6862701	5:127391249	T/C	LINC01184	intron	0.993	1.03624	0.0123	0.00395		7
rs6867078	5:127388283	A/T	LINC01184	intron	0.995	1.04404	0.0155	0.005378		6
rs6873339	5:127389650	T/C	LINC01184	intron	0.987	0.96657	0.0123	0.005821		7
rs6879970	5:127387178	A/G	LINC01184	intron	0.993	0.96503	0.0123	0.003918		7
rs6887276	5:127378294	C/G	LINC01184	intron	0.997	0.97006	0.0106	0.004226		7
rs6888037	5:127406259	T/G	LINC01184	intron	0.993	0.99253	0.0123	0.5437		7
rs72792267	5:127337974	A/T	LINC01184	near-gene-3	0.865	1.01806	0.0356	0.616		7
rs72792275	5:127362696	C/G	LINC01184	intron	0.857	0.98354	0.0438	0.7056		7
rs72792276	5:127364126	A/C	LINC01184	intron	0.983	1.01521	0.0174	0.3839		7
rs72792279	5:127374404	A/G	LINC01184	intron	0.993	1.01664	0.0172	0.3366		4
rs72792286	5:127391777	A/G	LINC01184	intron	0.791	1.02973	0.0566	0.6044		7
rs72792292	5:127410235	T/C	LINC01184	intron	0.861	0.96860	0.0193	0.09894		5
rs72792294	5:127412821	C/G	LINC01184	intron	0.919	1.02061	0.0299	0.4944		6
rs72794354	5:127413987	T/C	LINC01184	intron	0.918	1.02061	0.0298	0.4935		7
rs7379655	5:127383946	A/G	LINC01184	intron	0.995	0.95849	0.0155	0.006198		6
rs76208917	5:127410745	T/C	LINC01184	intron	0.914	0.96938	0.0203	0.1253		5
rs76485650	5:127395340	A/G	LINC01184	intron	0.702	0.99213	0.0374	0.8326		7
rs77004214	5:127415120	T/C	LINC01184	intron	0.842	1.01056	0.0277	0.7045		6
rs77140686	5:127395687	T/C	LINC01184	intron	0.965	1.02984	0.0203	0.148		6
rs78023317	5:127404436	A/C	LINC01184	intron	0.860	1.01593	0.0165	0.3377		7
rs78249330	5:127371160	A/G	LINC01184	intron	0.920	0.93847	0.0297	0.03264		6
rs78527051	5:127391635	A/G	LINC01184	intron	0.847	1.01227	0.0562	0.8276		7
rs78529289	5:127405378	T/C	LINC01184	intron	0.983	1.01643	0.0174	0.3472		6
rs79540727	5:127340908	T/C	LINC01184	near-gene-5	0.818	0.97064	0.0473	0.529		7
rs9800302	5:127365030	T/C	LINC01184	intron	0.995	0.96002	0.0155	0.008458		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information