LRP1

Basic Information

Gene Symbol	LRP1
Entrez Id	4035
Position	chr12:57522282..57607142
Description	low density lipoprotein receptor-related protein 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10747776	12:57528679	A/G	LRP1	intron	0.977	1.02634	0.0113	0.02133		7
rs10876964	12:57530814	T/C	LRP1	intron	0.989	0.97502	0.0111	0.02343		7
rs10876965	12:57531450	A/G	LRP1	intron	0.994	0.97590	0.0111	0.0277		7
rs10876966	12:57543572	T/C	LRP1	intron	0.945	1.02768	0.0128	0.03276		4
rs10876967	12:57570593	A/G	LRP1	intron	0.973	1.01745	0.0114	0.1302		5
rs116998609	12:57547205	C/G	LRP1	intron	0.753	1.02562	0.0269	0.3469		5
rs117324780	12:57566292	A/G	LRP1	intron	0.804	1.00511	0.0332	0.879		7
rs117506274	12:57535988	A/G	LRP1	intron	0.702	0.99581	0.0583	0.9424		5
rs117687310	12:57559066	T/C	LRP1	intron	0.695	1.01816	0.0559	0.7477		2b
rs117756404	12:57545856	T/C	LRP1	intron	0.692	0.98167	0.0559	0.7409		4
rs11837145	12:57570014	A/C	LRP1	intron	0.975	1.01501	0.0113	0.1883		4
rs12370981	12:57597918	T/C	LRP1	intron	0.950	1.00975	0.0123	0.4321		5
rs12371684	12:57564478	T/C	LRP1	intron	0.907	0.95409	0.0183	0.01019		7
rs12814239	12:57569478	T/C	LRP1	coding-synon	0.780	0.85847	0.0252	1.477E-9		5
rs140287808	12:57602279	A/G	LRP1	intron	0.629	0.84993	0.0622	0.008903		-
rs141768943	12:57563449	T/C	LRP1	intron	0.804	0.88320	0.0424	0.003411		-
rs142639073	12:57552035	T/C	LRP1	intron	0.637	1.03221	0.0594	0.5931		-
rs147497332	12:57541795	A/G	LRP1	intron	0.693	0.94167	0.0448	0.1796		-
rs148521822	12:57575939	A/G	LRP1	intron	0.633	0.85300	0.0623	0.01076		-
rs150937490	12:57592598	C/G	LRP1	intron	0.658	1.02634	0.0603	0.6662		-
rs17547610	12:57530341	A/C	LRP1	intron	0.945	0.99054	0.0150	0.5234		5
rs1799986	12:57535266	T/C	LRP1	coding-synon	0.966	0.99084	0.0152	0.5471		7
rs1800137	12:57548466	T/C	LRP1	coding-synon	0.746	1.09297	0.0371	0.01648		4
rs1800139	12:57585144	T/C	LRP1	coding-synon	0.983	0.98551	0.0112	0.1958		5
rs1800154	12:57589659	T/C	LRP1	coding-synon	0.981	1.01837	0.0113	0.1074		5
rs1800156	12:57590797	T/C	LRP1	coding-synon	0.981	1.01898	0.0113	0.09681		5
rs1800158	12:57593204	A/G	LRP1	intron	0.887	0.90095	0.0293	0.0003823		4
rs1800159	12:57593894	A/G	LRP1	intron	0.952	1.01959	0.0114	0.09039		1f
rs1800162	12:57603417	A/G	LRP1	intron	0.950	0.97638	0.0113	0.03496		5
rs1800163	12:57604756	A/C	LRP1	intron	0.819	0.95066	0.0603	0.4013		5
rs1800164	12:57604802	A/G	LRP1	intron	0.955	1.01735	0.0112	0.1244		5
rs1800165	12:57591226	T/C	LRP1	intron	0.983	0.98393	0.0113	0.1513		5
rs1800166	12:57591458	T/C	LRP1	intron	0.981	1.01898	0.0113	0.09651		5
rs1800168	12:57592557	T/C	LRP1	intron	0.983	0.98580	0.0112	0.2044		5
rs1800174	12:57559809	A/G	LRP1	intron	0.968	1.01481	0.0114	0.197		2b
rs1800175	12:57561379	T/G	LRP1	intron	0.969	1.01511	0.0114	0.1878		5
rs1800176	12:57561451	T/C	LRP1	intron	0.970	1.01268	0.0114	0.2686		5
rs1800177	12:57567180	T/G	LRP1	intron	0.974	1.01664	0.0114	0.1472		2b
rs1800178	12:57569114	A/G	LRP1	intron	0.879	1.10528	0.0295	0.000677		5
rs1800180	12:57569513	A/G	LRP1	intron	0.975	1.01684	0.0114	0.1404		5
rs1800181	12:57578288	T/C	LRP1	intron	0.978	1.01735	0.0113	0.1277		5
rs1800182	12:57579727	A/T	LRP1	intron	0.980	0.98324	0.0113	0.1344		2b
rs1800189	12:57589865	T/C	LRP1	intron	0.982	0.98501	0.0113	0.1811		4
rs1800191	12:57590758	T/C	LRP1	intron	0.981	1.01562	0.0113	0.1681		5
rs1800194	12:57567762	T/C	LRP1	coding-synon	0.974	1.01654	0.0114	0.1488		5
rs184635542	12:57526046	T/C	LRP1	intron	0.615	1.08676	0.0563	0.1395		-
rs187991760	12:57601105	A/T	LRP1	intron	0.852	1.03790	0.0195	0.05646		-
rs188571756	12:57583630	A/G	LRP1	intron	0.841	0.80945	0.0519	0.00004617		-
rs192373615	12:57600717	T/C	LRP1	intron	0.756	1.07251	0.0651	0.2821		-
rs34073963	12:57531930	A/G	LRP1	intron	0.671	0.90783	0.0348	0.005416		5
rs34237922	12:57547749	T/C	LRP1	intron	0.794	1.28672	0.0531	2.05E-6		5
rs34248177	12:57602632	A/G	LRP1	intron	0.790	1.08502	0.0550	0.138		5
rs34343116	12:57596052	A/G	LRP1	intron	0.803	1.08491	0.0606	0.1783		5
rs34393552	12:57536989	A/G	LRP1	intron	0.909	1.04833	0.0303	0.1195		7
rs34398639	12:57577872	T/C	LRP1	coding-synon,missense	0.788	0.98324	0.0441	0.7017		5
rs34505337	12:57552999	T/C	LRP1	intron	0.868	1.11071	0.0295	0.000378		7
rs34577247	12:57578673	A/G	LRP1	missense	0.813	0.97746	0.0367	0.5353		5
rs34656298	12:57533470	A/G	LRP1	intron	0.812	1.04991	0.0558	0.3833		5
rs34790089	12:57561993	T/C	LRP1	intron	0.786	1.05180	0.0327	0.1227		4
rs34949484	12:57594980	T/C	LRP1	intron	0.775	1.00773	0.0566	0.8916		5
rs34950222	12:57602408	C/G	LRP1	intron	0.790	1.08491	0.0550	0.1382		5
rs35012107	12:57555028	A/G	LRP1	intron	0.868	1.10927	0.0295	0.0004366		5
rs35021926	12:57606059	A/G	LRP1	intron	0.798	0.89619	0.0629	0.08119		5
rs35169508	12:57598567	T/C	LRP1	intron	0.932	1.13508	0.0544	0.01989		4
rs35292422	12:57595433	T/C	LRP1	intron	0.724	1.08524	0.0348	0.01878		5
rs35720812	12:57568011	T/C	LRP1	intron	0.933	1.13338	0.0544	0.02148		3a
rs35820631	12:57576492	A/G	LRP1	intron	0.877	1.10473	0.0296	0.0007626		7
rs4074309	12:57580522	A/G	LRP1	intron	0.981	1.01379	0.0113	0.2253		5
rs4077658	12:57586154	A/C	LRP1	intron	0.970	1.00220	0.0118	0.85		4
rs4257011	12:57528197	A/G	LRP1	intron	0.977	1.02634	0.0113	0.02118		5
rs4367982	12:57531632	A/G	LRP1	intron	0.997	0.97570	0.0110	0.02568		1f
rs4759044	12:57530670	T/C	LRP1	intron	0.975	0.98580	0.0108	0.1843		1f
rs4759045	12:57534641	A/G	LRP1	intron	0.985	1.02593	0.0113	0.02309		6
rs4759276	12:57526646	A/G	LRP1	intron	0.964	1.03035	0.0110	0.006729		5
rs4759277	12:57533690	A/C	LRP1	intron	1.000	1.02470	0.0110	0.02656		1f
rs57916742	12:57544931	A/G	LRP1	intron	0.875	0.98334	0.0114	0.1418		7
rs6581124	12:57545756	A/G	LRP1	intron	0.904	1.03790	0.0128	0.003533		5
rs6581125	12:57561920	T/G	LRP1	intron	0.967	0.98738	0.0114	0.263		4
rs6581128	12:57583672	A/C	LRP1	intron	0.982	1.01704	0.0113	0.1342		5
rs7312323	12:57583486	A/G	LRP1	intron	0.982	1.01704	0.0113	0.1337		5
rs73342535	12:57544620	T/C	LRP1	intron	0.748	1.07401	0.0365	0.0506		5
rs73342540	12:57545531	A/G	LRP1	intron	0.749	1.07423	0.0365	0.05004		5
rs76362380	12:57599981	A/C	LRP1	intron	0.872	1.05876	0.0237	0.01591		5
rs78012789	12:57526299	A/G	LRP1	intron	0.874	1.01461	0.0481	0.7632		5
rs79434392	12:57583853	T/C	LRP1	intron	0.780	0.97844	0.0292	0.4565		5
rs9669595	12:57595066	A/G	LRP1	intron	0.957	1.01847	0.0113	0.1063		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information