NOTCH4

Basic Information

Gene Symbol	NOTCH4
Entrez Id	4855
Position	chr6:3633298..3662520
Description	notch 4
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs115418659	6:32167532	A/G	NOTCH4	intron	0.778	0.99432	0.0559	0.9185		5
rs116753971	6:32177077	A/T	NOTCH4	intron	0.677	0.91074	0.0378	0.0135		5
rs138753323	6:32173599	T/C	NOTCH4	intron	0.736	1.08676	0.0383	0.02991		-
rs149001409	6:32176308	A/G	NOTCH4	intron	0.710	0.98344	0.0493	0.7345		-
rs150079294	6:32180684	A/C	NOTCH4	missense	0.832	0.99372	0.0533	0.9059		-
rs151002670	6:32170837	T/C	NOTCH4	intron	0.757	1.05717	0.0326	0.08758		-
rs187570181	6:32164587	T/C	NOTCH4	intron,near-gene-5	0.872	1.00120	0.0405	0.976		-
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information