NRGN

Basic Information

Gene Symbol	NRGN
Entrez Id	4900
Position	chr11:124609829..124617102
Description	neurogranin (protein kinase C substrate, RC3)
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs12278912	11:124612159	A/G	NRGN	intron	0.993	0.94327	0.0122	1.658E-6		5
rs12287365	11:124612710	A/T	NRGN	intron,ncRNA	0.991	0.94337	0.0122	1.756E-6		5
rs12293621	11:124612828	A/C	NRGN	intron,ncRNA	0.991	1.06003	0.0122	1.768E-6		5
rs12293624	11:124612833	A/G	NRGN	intron,ncRNA	0.991	1.06003	0.0122	1.782E-6		5
rs12293670	11:124612932	A/G	NRGN	intron,ncRNA	0.988	1.08101	0.0113	4.685E-12		5
rs35306015	11:124610773	A/G	NRGN	intron	0.961	1.08177	0.0205	0.0001265		4
rs61910607	11:124609369	T/G	NRGN	near-gene-5	0.973	1.05919	0.0193	0.002898		2b
rs655104	11:124608304	T/G	NRGN	near-gene-5	0.717	1.02296	0.0302	0.4517		5
rs7113041	11:124612591	C/G	NRGN	intron,near-gene-3	0.991	1.06014	0.0122	1.717E-6		5
rs71491832	11:124611997	C/G	NRGN	intron	0.969	1.09133	0.0208	0.00002544		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
21489405	GWAS	834 cases; 672 controls
Reference	Study type	Sample size

eQTL Information