NT5DC2

Basic Information

Gene Symbol	NT5DC2
Entrez Id	64943
Position	chr3:52558385..52569093
Description	5'-nucleotidase domain containing 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs11709284	3:52559705	A/G	NT5DC2	intron	0.991	0.94923	0.0106	9.387E-7		5
rs13066389	3:52565317	T/C	NT5DC2	intron	0.981	0.96445	0.0200	0.07004		5
rs13066644	3:52565247	A/G	NT5DC2	intron	0.981	0.96406	0.0200	0.06748		5
rs146460877	3:52562716	T/C	NT5DC2	intron	0.678	1.04592	0.0562	0.4239		-
rs35371456	3:52563462	T/C	NT5DC2	intron	0.981	0.96387	0.0200	0.06573		5
rs35920544	3:52563199	A/T	NT5DC2	missense,untranslated-5	0.995	0.93239	0.0391	0.07306		5
rs4282054	3:52566065	T/C	NT5DC2	intron	0.982	1.05475	0.0106	5.676E-7		1b
rs4475032	3:52560021	T/C	NT5DC2	intron	0.995	0.95715	0.0106	0.00003439		1f
rs4687624	3:52563572	T/C	NT5DC2	intron	0.993	0.95705	0.0106	0.00003321		5
rs4687625	3:52563718	T/C	NT5DC2	intron	0.988	0.95772	0.0106	0.00004682		1f
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information