PJA1

Basic Information

Gene Symbol	PJA1
Entrez Id	64219
Position	chrX:68380581..68385365
Description	praja ring finger 1, E3 ubiquitin protein ligase
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs113433731	0:68383684	A/G	PJA1	intron	1.300	1.04530	0.0283	0.1174		5
rs138056393	0:68384331	T/C	PJA1	intron	0.697	0.99820	0.1253	0.9882		-
rs147767754	0:68384092	A/G	PJA1	intron	0.963	0.99164	0.0520	0.8723		-
rs4844165	0:68384227	A/G	PJA1	intron	1.380	1.00100	0.0120	0.9362		5
rs5937160	0:68381787	T/C	PJA1	missense	1.340	1.06940	0.0107	4.27E-10		7
rs6624385	0:68384125	T/C	PJA1	intron	1.410	0.95839	0.0094	6.349E-6		5
rs7067170	0:68382836	A/G	PJA1	coding-synon	1.340	1.07058	0.0107	2.195E-10		5
rs73222545	0:68385511	C/G	PJA1	near-gene-5	1.150	1.01582	0.0120	0.1922		4
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information