PPP4C

Basic Information

Gene Symbol	PPP4C
Entrez Id	5531
Position	chr16:30087385..30096695
Description	protein phosphatase 4, catalytic subunit
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs11861842	16:30094180	T/C	PPP4C	intron	0.953	1.06247	0.0224	0.006759		4
rs11863129	16:30095492	T/C	PPP4C	intron	0.952	1.06258	0.0224	0.006743		3a
rs12445768	16:30089911	T/C	PPP4C	intron	0.971	1.03572	0.0107	0.001061		5
rs12447915	16:30089908	T/C	PPP4C	intron	0.971	0.96541	0.0107	0.001053		5
rs2278557	16:30093779	C/G	PPP4C	intron	0.976	1.05359	0.0109	1.686E-6		5
rs72791226	16:30091251	T/C	PPP4C	intron	0.718	1.06109	0.0392	0.1309		7
rs74767856	16:30095734	A/G	PPP4C	intron	0.925	1.06439	0.0215	0.00368		4
rs8049837	16:30089438	T/C	PPP4C	intron	0.954	1.06173	0.0224	0.007392		4
rs9932605	16:30092048	A/G	PPP4C	intron	0.954	1.03666	0.0108	0.0008704		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
19855392	Regional	4551 cases; 6391 controls
Reference	Study type	Sample size

eQTL Information