PSKH1

Basic Information

Gene Symbol	PSKH1
Entrez Id	5681
Position	chr16:67927175..67963581
Description	protein serine kinase H1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs111465361	16:67955241	A/G	PSKH1	intron	0.994	1.03894	0.0164	0.0197		6
rs112434994	16:67954398	C/G	PSKH1	intron	0.994	1.03894	0.0164	0.01972		7
rs113563886	16:67947158	T/C	PSKH1	intron	0.983	0.96493	0.0161	0.02658		7
rs114884917	16:67951830	A/G	PSKH1	intron	0.998	1.08047	0.0260	0.002885		5
rs116906584	16:67931034	A/G	PSKH1	intron	0.999	1.08166	0.0260	0.002535		6
rs117312671	16:67936863	A/G	PSKH1	intron	0.917	0.95839	0.0511	0.4053		5
rs118106500	16:67931383	T/C	PSKH1	intron	0.999	1.08166	0.0260	0.002533		5
rs12599580	16:67950613	T/C	PSKH1	intron	0.934	0.99084	0.0115	0.4239		5
rs138372957	16:67927930	A/G	PSKH1	intron	0.857	0.95839	0.0365	0.2438		-
rs139165311	16:67940490	A/G	PSKH1	intron	0.999	0.92459	0.0260	0.002582		-
rs140151066	16:67956008	A/T	PSKH1	intron	0.999	0.92469	0.0260	0.002598		-
rs140677469	16:67931787	A/G	PSKH1	intron	0.999	1.08166	0.0260	0.002532		-
rs141010400	16:67953318	T/C	PSKH1	intron	0.889	1.02685	0.0599	0.6585		-
rs141039314	16:67938165	T/C	PSKH1	intron	0.999	1.07799	0.0256	0.003383		-
rs141231719	16:67940267	A/G	PSKH1	intron	0.999	1.08156	0.0260	0.00258		-
rs143807613	16:67937270	A/G	PSKH1	intron	0.836	1.09221	0.0393	0.025		-
rs144035550	16:67940727	C/G	PSKH1	intron	0.670	1.08883	0.0483	0.07813		-
rs145386256	16:67941416	A/G	PSKH1	intron	0.842	0.98039	0.0208	0.3415		-
rs148666324	16:67940264	T/C	PSKH1	intron	0.999	1.08242	0.0260	0.002312		-
rs150221824	16:67938403	T/C	PSKH1	intron	0.996	1.07842	0.0256	0.003166		-
rs150569523	16:67935436	T/C	PSKH1	intron	0.836	1.07058	0.0455	0.1335		-
rs151264254	16:67957311	A/G	PSKH1	intron	0.882	0.94829	0.0472	0.2603		-
rs16942887	16:67928042	A/G	PSKH1	intron	1.000	1.03614	0.0161	0.02807		4
rs16957590	16:67934725	A/G	PSKH1	intron	1.010	0.92988	0.0243	0.002785		1f
rs186305599	16:67926613	A/G	PSKH1	near-gene-5	0.853	1.05717	0.0656	0.3966		-
rs2136649	16:67930539	A/G	PSKH1	intron	0.718	1.03738	0.0295	0.214		5
rs2271295	16:67927230	A/C	PSKH1	untranslated-5	0.669	1.00572	0.0400	0.8863		2a
rs28542199	16:67936975	T/C	PSKH1	intron	1.010	0.93165	0.0243	0.003539		5
rs34298659	16:67927697	T/C	PSKH1	intron	0.861	0.94667	0.0329	0.09575		4
rs35268848	16:67927240	A/C	PSKH1	untranslated-5	0.675	1.03004	0.0332	0.3732		4
rs35662882	16:67944626	A/G	PSKH1	intron	0.860	0.94639	0.0329	0.09444		7
rs35893568	16:67940757	A/C	PSKH1	intron	0.860	1.05654	0.0329	0.09459		7
rs6499145	16:67929601	T/C	PSKH1	intron	1.000	0.95037	0.0140	0.000275		6
rs7196789	16:67927124	T/C	PSKH1	near-gene-5	1.000	1.05348	0.0141	0.0002195		4
rs72790373	16:67934780	T/C	PSKH1	intron	0.760	1.03210	0.0595	0.5954		7
rs73594556	16:67925435	A/G	PSKH1	near-gene-5	1.000	1.03645	0.0161	0.02669		7
rs73594581	16:67955554	A/G	PSKH1	intron	0.994	1.03873	0.0164	0.02021		5
rs76944074	16:67951827	A/G	PSKH1	intron	0.998	1.08047	0.0260	0.002885		5
rs78033175	16:67931431	A/G	PSKH1	intron	0.999	1.08166	0.0260	0.002534		5
rs78572164	16:67931112	A/T	PSKH1	intron	0.716	1.00773	0.0187	0.6787		5
rs79327462	16:67958058	A/G	PSKH1	intron	0.999	1.07702	0.0256	0.003732		5
rs79576279	16:67958239	T/C	PSKH1	intron	0.999	1.08145	0.0260	0.0026		5
rs8054091	16:67931826	T/C	PSKH1	intron	0.986	0.97258	0.0166	0.09417		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information