PSMD6

Basic Information

Gene Symbol	PSMD6
Entrez Id	9861
Position	chr3:63996231..64009120
Description	proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs114365073	3:64009318	C/G	PSMD6	intron,near-gene-5	0.709	0.93669	0.0433	0.1313		4
rs114898756	3:64006102	T/C	PSMD6	intron	0.963	0.96252	0.0540	0.4794		6
rs140387621	3:64004759	C/G	PSMD6	intron	0.916	1.07026	0.0420	0.106		-
rs140556251	3:64001932	A/G	PSMD6	intron	0.847	0.91247	0.0607	0.1309		-
rs145672978	3:64006935	T/C	PSMD6	intron	0.698	0.98177	0.0765	0.8097		-
rs150597459	3:64008722	C/G	PSMD6	intron	0.972	1.03562	0.0505	0.4883		-
rs17069687	3:64004173	A/G	PSMD6	intron	0.981	1.01400	0.0389	0.7199		7
rs17344090	3:64004101	T/C	PSMD6	intron	0.981	0.95075	0.0152	0.0008762		7
rs2578011	3:64004819	T/C	PSMD6	intron	0.985	1.04655	0.0145	0.001682		7
rs3846221	3:64008510	T/C	PSMD6	intron	0.975	0.95113	0.0158	0.001511		5
rs71298698	3:64007031	A/T	PSMD6	intron	0.749	0.94999	0.0284	0.07046		7
rs72878921	3:64006092	T/C	PSMD6	intron	0.970	1.00451	0.0313	0.8859		6
rs72878922	3:64007176	T/C	PSMD6	intron	0.953	0.96397	0.0526	0.485		6
rs73834178	3:64003692	A/C	PSMD6	intron	0.972	0.95037	0.0539	0.3453		7
rs73834181	3:64004776	T/G	PSMD6	intron	0.981	0.98364	0.0394	0.6754		6
rs73834182	3:64004943	A/G	PSMD6	intron	0.980	0.98649	0.0393	0.7285		5
rs74397545	3:64006773	A/G	PSMD6	intron	0.975	0.98689	0.0394	0.738		6
rs76478992	3:64003105	A/G	PSMD6	intron	0.712	0.93323	0.0316	0.02847		5
rs831691	3:64007214	C/G	PSMD6	intron	0.967	0.96223	0.0136	0.004619		7
rs831692	3:64003983	A/G	PSMD6	intron	0.985	1.05432	0.0113	2.999E-6		6
rs9809432	3:64002953	A/G	PSMD6	intron	0.990	1.04802	0.0144	0.001177		5
rs9828933	3:64002897	T/C	PSMD6	intron	0.990	0.96041	0.0138	0.003468		5
rs9879045	3:64001925	T/C	PSMD6	intron	0.984	1.05929	0.0116	6.558E-7		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information