R3HDM2

Basic Information

Gene Symbol	R3HDM2
Entrez Id	22864
Position	chr12:57647548..57704246
Description	R3H domain containing 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10747777	12:57694370	A/T	R3HDM2	intron,near-gene-3	0.998	0.98699	0.0106	0.2148		5
rs10747778	12:57694418	C/G	R3HDM2	intron,near-gene-3	1.000	1.01390	0.0106	0.1923		5
rs10783823	12:57750783	C/G	R3HDM2	intron	0.998	0.98560	0.0106	0.1722		7
rs10876971	12:57694732	A/T	R3HDM2	intron	0.987	0.95762	0.0121	0.0003693		6
rs10876973	12:57727301	T/C	R3HDM2	intron	0.994	0.95456	0.0121	0.0001262		7
rs10876974	12:57732925	T/C	R3HDM2	intron	0.994	0.95428	0.0121	0.0001129		5
rs10876976	12:57754503	T/G	R3HDM2	intron	0.985	1.01329	0.0107	0.2158		6
rs10876977	12:57754599	A/G	R3HDM2	intron	0.979	0.98511	0.0107	0.1593		6
rs10876978	12:57769533	A/G	R3HDM2	intron	0.985	1.01308	0.0107	0.2215		7
rs10876980	12:57785501	T/C	R3HDM2	intron	0.993	1.01521	0.0106	0.1539		7
rs10876981	12:57786897	T/C	R3HDM2	intron	0.974	1.01086	0.0107	0.3127		6
rs10876982	12:57819004	A/G	R3HDM2	intron	0.897	0.96137	0.0203	0.05252		7
rs1106766	12:57809456	T/C	R3HDM2	intron	1.010	1.03169	0.0126	0.01296		6
rs11172170	12:57736138	A/T	R3HDM2	intron	0.997	0.98560	0.0106	0.1706		4
rs11172185	12:57764183	A/G	R3HDM2	intron,near-gene-3	0.867	1.00090	0.0114	0.9366		6
rs11172192	12:57769131	T/C	R3HDM2	intron	0.881	1.02306	0.0167	0.1715		6
rs112193976	12:57765257	T/C	R3HDM2	intron	0.843	0.94120	0.0226	0.007296		5
rs112608380	12:57810547	T/C	R3HDM2	intron	0.620	0.98837	0.0575	0.8393		5
rs112639655	12:57711329	A/G	R3HDM2	intron	0.821	1.05781	0.0229	0.01427		6
rs113415285	12:57823271	T/C	R3HDM2	intron	0.629	0.97424	0.0673	0.6982		6
rs113458031	12:57796267	A/G	R3HDM2	intron	0.682	1.02521	0.0368	0.4991		7
rs114579825	12:57732599	T/C	R3HDM2	intron	0.723	1.00090	0.0537	0.987		5
rs116265576	12:57748764	T/C	R3HDM2	intron	0.858	1.07885	0.0606	0.2105		6
rs116863803	12:57801507	A/G	R3HDM2	intron	0.783	1.00723	0.0346	0.8354		6
rs117374366	12:57780166	C/G	R3HDM2	intron	0.857	0.93838	0.0609	0.2963		5
rs117387969	12:57731294	T/C	R3HDM2	intron	0.661	0.98995	0.0497	0.8391		7
rs117605132	12:57789323	A/G	R3HDM2	intron	0.971	0.92090	0.0263	0.001754		6
rs117796570	12:57730923	T/C	R3HDM2	intron	0.803	0.93230	0.0600	0.2427		6
rs117929674	12:57746003	T/C	R3HDM2	intron	0.729	0.97142	0.0327	0.376		7
rs11830804	12:57734892	A/C	R3HDM2	intron	0.994	0.95390	0.0121	0.00009925		6
rs12230111	12:57822616	A/G	R3HDM2	intron	0.989	0.98442	0.0106	0.1401		7
rs12313306	12:57751854	T/C	R3HDM2	intron	1.000	1.03159	0.0126	0.01368		6
rs12313762	12:57692470	T/C	R3HDM2	intron,near-gene-5	0.982	1.02840	0.0127	0.02707		7
rs12315434	12:57780936	A/C	R3HDM2	intron	0.997	0.96358	0.0129	0.004047		5
rs12369598	12:57815228	T/C	R3HDM2	intron	0.931	1.01745	0.0109	0.1135		6
rs12580135	12:57759057	T/G	R3HDM2	intron	0.964	1.01450	0.0108	0.1823		6
rs12582640	12:57759058	A/T	R3HDM2	intron	0.934	0.98748	0.0110	0.2488		6
rs12812140	12:57728978	T/G	R3HDM2	intron	0.997	0.98334	0.0106	0.1124		6
rs12820078	12:57767214	A/G	R3HDM2	intron	0.982	0.95447	0.0121	0.0001177		7
rs138451889	12:57820023	A/T	R3HDM2	intron	0.847	0.86936	0.0689	0.04212		-
rs139380323	12:57801439	T/C	R3HDM2	intron	0.737	1.02984	0.0393	0.4551		-
rs139601483	12:57765898	T/C	R3HDM2	intron	0.752	1.00240	0.0504	0.9616		-
rs139741158	12:57774816	C/G	R3HDM2	intron	0.720	0.98452	0.0425	0.7126		-
rs139748500	12:57726888	C/G	R3HDM2	intron	0.609	0.93370	0.0851	0.4202		-
rs140255867	12:57717620	A/G	R3HDM2	intron	0.649	1.01990	0.0589	0.7383		-
rs141299103	12:57715787	T/C	R3HDM2	intron	0.642	0.96676	0.0353	0.3387		-
rs141887603	12:57820736	T/C	R3HDM2	intron	0.756	0.97971	0.0592	0.7295		-
rs142659567	12:57751474	A/G	R3HDM2	intron	0.821	1.03324	0.0450	0.4677		-
rs143370650	12:57714139	T/C	R3HDM2	intron	0.872	1.22777	0.0521	0.00008128		-
rs143549627	12:57797043	A/G	R3HDM2	intron	0.797	1.01704	0.0355	0.635		-
rs144609873	12:57733252	A/G	R3HDM2	intron	0.620	1.09243	0.0491	0.07213		-
rs144921611	12:57804432	T/C	R3HDM2	intron	0.941	0.88595	0.0545	0.0262		-
rs144957022	12:57800803	A/G	R3HDM2	intron	0.971	1.08643	0.0263	0.001608		-
rs146080098	12:57771405	T/C	R3HDM2	intron	0.618	1.06449	0.0702	0.373		-
rs146984701	12:57717756	A/G	R3HDM2	intron	0.863	1.21470	0.0517	0.0001688		-
rs147146305	12:57714331	T/C	R3HDM2	intron	0.916	0.94999	0.0509	0.3128		-
rs149653972	12:57702325	T/C	R3HDM2	intron	0.865	0.92339	0.0606	0.1886		-
rs1798710	12:57815922	C/G	R3HDM2	intron	0.994	1.01298	0.0106	0.2226		6
rs181915944	12:57760753	A/T	R3HDM2	intron	0.757	0.94346	0.0465	0.2106		-
rs183355104	12:57758685	A/G	R3HDM2	intron	0.910	1.01025	0.0553	0.8528		-
rs183892473	12:57798103	T/C	R3HDM2	intron	0.646	1.03314	0.0579	0.5739		-
rs187096571	12:57753793	A/T	R3HDM2	intron	0.686	1.02994	0.0310	0.3413		-
rs187577873	12:57823546	A/G	R3HDM2	intron	0.752	1.00310	0.0505	0.9517		-
rs189018064	12:57763657	T/C	R3HDM2	intron	0.789	0.92330	0.0491	0.1037		-
rs190539537	12:57764411	A/G	R3HDM2	intron	0.915	0.95066	0.0508	0.3197		-
rs191281593	12:57776715	A/G	R3HDM2	intron	0.743	1.09647	0.0618	0.136		-
rs191813978	12:57785947	A/G	R3HDM2	intron	0.798	0.96050	0.0464	0.3857		-
rs191923869	12:57753807	T/C	R3HDM2	intron	0.675	0.97697	0.0168	0.1645		-
rs192657036	12:57701229	A/G	R3HDM2	intron	0.942	1.13746	0.0537	0.01656		-
rs2063778	12:57811414	T/G	R3HDM2	intron	0.994	0.98452	0.0106	0.1408		1f
rs2122982	12:57781893	A/G	R3HDM2	intron	1.000	1.03138	0.0126	0.01457		7
rs28473132	12:57707358	A/T	R3HDM2	intron	0.966	1.04791	0.0125	0.0001768		6
rs28504983	12:57821487	A/G	R3HDM2	intron	0.994	0.98708	0.0106	0.2213		6
rs34162257	12:57760694	T/C	R3HDM2	intron	0.699	1.01796	0.0224	0.4265		7
rs34453452	12:57777755	A/G	R3HDM2	intron	0.986	1.00461	0.0107	0.6656		7
rs34537746	12:57755151	T/G	R3HDM2	intron	0.989	0.99790	0.0107	0.8416		7
rs35032945	12:57714142	A/C	R3HDM2	intron	0.997	0.98373	0.0106	0.1216		5
rs35058761	12:57754800	T/G	R3HDM2	intron	0.986	0.99601	0.0107	0.7112		7
rs36050407	12:57725629	A/G	R3HDM2	intron	0.991	0.95409	0.0121	0.0001062		7
rs4108243	12:57779821	A/G	R3HDM2	intron	0.995	1.01582	0.0106	0.1396		6
rs4760192	12:57707800	T/C	R3HDM2	intron	0.970	0.98610	0.0107	0.1937		7
rs4760193	12:57705272	A/G	R3HDM2	intron,near-gene-5	0.999	0.98551	0.0106	0.1674		7
rs4760228	12:57761103	A/C	R3HDM2	intron	0.995	1.01268	0.0106	0.2332		4
rs4760236	12:57761777	A/G	R3HDM2	intron	0.995	1.01258	0.0106	0.2377		7
rs4760254	12:57766392	C/G	R3HDM2	intron	1.000	1.02901	0.0126	0.02359		5
rs4760278	12:57771153	A/C	R3HDM2	intron	0.999	1.03769	0.0129	0.004119		4
rs4760305	12:57780127	T/C	R3HDM2	intron	0.997	1.01491	0.0106	0.163		5
rs4760306	12:57780240	A/C	R3HDM2	intron	0.993	1.01430	0.0106	0.1812		5
rs4760308	12:57752177	T/C	R3HDM2	intron	0.996	0.98491	0.0106	0.1511		7
rs4760348	12:57731009	A/G	R3HDM2	intron	0.996	1.01532	0.0106	0.1514		6
rs4760355	12:57725197	A/G	R3HDM2	intron	0.999	1.03107	0.0126	0.0151		6
rs4760356	12:57724941	T/C	R3HDM2	intron	0.998	1.01450	0.0106	0.173		5
rs4760357	12:57724274	C/G	R3HDM2	intron	0.969	0.98649	0.0108	0.207		7
rs487722	12:57824165	T/G	R3HDM2	intron	0.963	0.94431	0.0127	6.764E-6		4
rs505479	12:57771686	T/C	R3HDM2	intron	0.995	0.95542	0.0121	0.0001697		7
rs507096	12:57818830	T/C	R3HDM2	intron	0.627	1.00471	0.0251	0.8514		7
rs512223	12:57762560	A/G	R3HDM2	intron	0.995	0.98748	0.0106	0.2338		4
rs519452	12:57806855	A/G	R3HDM2	intron	0.993	0.95562	0.0121	0.0001851		7
rs59470370	12:57816540	A/G	R3HDM2	intron	0.963	1.08578	0.0257	0.001395		7
rs60231726	12:57753819	T/C	R3HDM2	intron	0.619	1.01298	0.0288	0.6555		6
rs60636710	12:57792182	T/C	R3HDM2	intron,near-gene-5	0.978	0.91411	0.0259	0.0005212		6
rs61937617	12:57714973	T/C	R3HDM2	intron	0.864	1.02041	0.0169	0.2334		7
rs6581134	12:57698688	T/C	R3HDM2	intron,near-gene-5	0.995	0.98531	0.0106	0.1641		6
rs6581135	12:57711511	A/G	R3HDM2	intron	1.000	0.98551	0.0106	0.1691		6
rs6581136	12:57714459	C/G	R3HDM2	intron	0.998	1.01450	0.0106	0.1743		7
rs6581138	12:57744864	A/G	R3HDM2	intron	0.992	0.95399	0.0122	0.0001082		7
rs6581139	12:57747311	T/C	R3HDM2	intron	0.998	1.01430	0.0106	0.1791		6
rs6581140	12:57757387	A/C	R3HDM2	intron	0.981	0.99661	0.0108	0.7497		6
rs67161907	12:57807855	C/G	R3HDM2	intron	0.969	0.99621	0.0108	0.726		6
rs68147365	12:57789359	A/G	R3HDM2	intron	0.992	1.03087	0.0127	0.0168		7
rs7132367	12:57815272	T/C	R3HDM2	intron	0.994	0.98708	0.0106	0.222		7
rs7133366	12:57744961	C/G	R3HDM2	intron	0.988	0.98285	0.0106	0.104		6
rs7307059	12:57729889	T/C	R3HDM2	intron	0.998	0.98580	0.0106	0.1759		7
rs7309659	12:57739634	T/C	R3HDM2	intron	0.998	1.01501	0.0106	0.1591		6
rs73115907	12:57754701	A/G	R3HDM2	intron	0.991	0.95485	0.0122	0.0001454		6
rs73115999	12:57778221	T/C	R3HDM2	intron	0.702	0.82111	0.0349	1.638E-8		6
rs73117622	12:57809952	A/G	R3HDM2	intron	0.739	1.04823	0.0526	0.3712		6
rs73121803	12:57713224	T/C	R3HDM2	intron	0.641	1.03811	0.0560	0.5044		5
rs7313824	12:57710398	T/C	R3HDM2	intron	0.996	1.01532	0.0106	0.1517		7
rs7398058	12:57728608	A/G	R3HDM2	intron	0.998	0.98580	0.0106	0.1759		7
rs75541030	12:57771646	A/G	R3HDM2	intron	0.857	0.93857	0.0609	0.2976		7
rs75855910	12:57734272	T/C	R3HDM2	intron	0.852	1.06940	0.0602	0.2655		5
rs75927231	12:57754491	A/G	R3HDM2	intron	0.828	0.99302	0.0228	0.7578		6
rs75991289	12:57732027	A/G	R3HDM2	intron	0.658	1.00672	0.0242	0.7805		7
rs76195886	12:57722820	A/G	R3HDM2	intron	0.964	0.92626	0.0266	0.003922		6
rs76522560	12:57765811	A/G	R3HDM2	intron	0.978	1.09275	0.0259	0.0006188		7
rs77521820	12:57777712	T/G	R3HDM2	intron	0.832	0.99283	0.0230	0.7528		7
rs78477939	12:57790803	A/G	R3HDM2	intron,near-gene-5	0.971	1.08589	0.0263	0.001755		7
rs78542359	12:57702027	T/C	R3HDM2	intron	0.859	0.92858	0.0605	0.2206		6
rs78565619	12:57804055	T/G	R3HDM2	intron	0.859	1.06620	0.0609	0.2923		6
rs78687108	12:57806219	T/C	R3HDM2	intron	0.825	1.04456	0.0515	0.3969		6
rs79240883	12:57712618	A/C	R3HDM2	intron	0.859	1.08080	0.0606	0.1997		7
rs79395356	12:57738600	T/G	R3HDM2	intron	0.997	0.96967	0.0126	0.01483		6
rs79654308	12:57766288	A/G	R3HDM2	intron	0.915	0.95066	0.0508	0.3196		5
rs7975026	12:57713141	A/G	R3HDM2	intron	0.985	1.00511	0.0107	0.6365		7
rs79750580	12:57716027	A/G	R3HDM2	intron	0.781	1.04248	0.0558	0.456		6
rs7975347	12:57713658	A/C	R3HDM2	intron	0.939	1.01045	0.0110	0.3444		4
rs7980310	12:57789960	T/C	R3HDM2	intron	0.984	0.98768	0.0107	0.2448		7
rs9788042	12:57752944	A/C	R3HDM2	intron	0.612	1.06290	0.0328	0.06311		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information