RLBP1

Basic Information

Gene Symbol	RLBP1
Entrez Id	6017
Position	chr15:89753098..89764922
Description	retinaldehyde binding protein 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs111950008	15:89757303	A/G	RLBP1	intron	0.737	0.88621	0.0487	0.01305		6
rs117021650	15:89763616	A/G	RLBP1	intron	0.833	0.97961	0.0387	0.5949		5
rs17228503	15:89763206	T/C	RLBP1	intron	0.995	1.01329	0.0108	0.2219		5
rs184653493	15:89763661	T/C	RLBP1	intron	0.814	1.00491	0.0527	0.9264		-
rs2070780	15:89760997	T/C	RLBP1	intron	0.998	0.97142	0.0106	0.006234		7
rs2283433	15:89763603	A/G	RLBP1	intron	0.991	0.97912	0.0106	0.04739		5
rs2283434	15:89763535	T/C	RLBP1	intron	0.992	0.97912	0.0106	0.04698		5
rs2529936	15:89757427	T/C	RLBP1	intron	0.968	0.95925	0.0110	0.0001524		7
rs2710	15:89753220	T/C	RLBP1	untranslated-3	1.010	0.98364	0.0109	0.1278		7
rs2854516	15:89761488	A/G	RLBP1	intron	0.980	0.97132	0.0191	0.1276		5
rs28593051	15:89755962	T/C	RLBP1	intron	0.980	1.02942	0.0162	0.07396		6
rs3825991	15:89761664	A/C	RLBP1	intron	1.010	0.97035	0.0105	0.004363		6
rs4932483	15:89758552	A/G	RLBP1	intron	0.891	0.97006	0.0229	0.1855		5
rs62020304	15:89761356	T/C	RLBP1	intron	0.978	0.96957	0.0192	0.1067		6
rs62020305	15:89762828	T/C	RLBP1	intron	0.843	0.95552	0.0309	0.1405		5
rs72762628	15:89754216	A/G	RLBP1	intron	0.746	0.97200	0.0219	0.195		7
rs950540	15:89754864	T/C	RLBP1	intron	1.000	0.98236	0.0109	0.1023		7
rs979170	15:89755576	A/G	RLBP1	intron	0.998	0.98246	0.0109	0.1041		6
rs979171	15:89755448	A/C	RLBP1	intron	0.989	0.95820	0.0110	0.00009817		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information