SEZ6L2

Basic Information

Gene Symbol	SEZ6L2
Entrez Id	26470
Position	chr16:29882480..29910580
Description	seizure related 6 homolog (mouse)-like 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs112796947	16:29902840	T/C	SEZ6L2	intron	0.812	1.02675	0.0180	0.1426		5
rs113443718	16:29892184	A/G	SEZ6L2	intron	0.935	0.98511	0.0121	0.2149		7
rs113753753	16:29891206	T/C	SEZ6L2	missense	0.685	0.98758	0.0441	0.7769		5
rs11649499	16:29908433	C/G	SEZ6L2	intron,missense	0.802	0.99970	0.0146	0.9844		5
rs12325239	16:29894662	T/C	SEZ6L2	intron	0.673	0.94082	0.0355	0.08524		7
rs12917712	16:29882490	T/C	SEZ6L2	untranslated-3	1.000	0.98167	0.0113	0.1016		6
rs12919612	16:29895303	C/G	SEZ6L2	intron	0.963	0.97716	0.0112	0.04039		7
rs12930239	16:29908777	C/G	SEZ6L2	intron	0.967	1.02235	0.0112	0.04947		5
rs13332660	16:29905882	T/C	SEZ6L2	intron	0.813	1.00210	0.0146	0.8876		6
rs141162502	16:29904640	T/C	SEZ6L2	intron	0.629	1.05253	0.0545	0.3483		-
rs150650092	16:29897052	T/C	SEZ6L2	coding-synon	0.629	0.97629	0.0524	0.6475		-
rs4787483	16:29885447	A/G	SEZ6L2	intron	0.976	1.01593	0.0117	0.1775		1f
rs4787484	16:29906546	T/C	SEZ6L2	intron	0.965	0.97902	0.0113	0.05988		7
rs58530271	16:29895374	A/G	SEZ6L2	intron	0.631	0.95256	0.0418	0.2448		5
rs58787556	16:29886986	T/C	SEZ6L2	intron	0.745	1.00773	0.0141	0.5822		5
rs59739463	16:29899291	T/C	SEZ6L2	intron	0.647	1.04812	0.0418	0.2612		5
rs59865082	16:29887185	A/G	SEZ6L2	intron	0.676	0.96425	0.0430	0.3977		7
rs59984375	16:29900232	T/C	SEZ6L2	intron	0.642	0.95791	0.0422	0.3082		6
rs60681698	16:29900974	A/G	SEZ6L2	intron	0.642	0.95409	0.0420	0.2634		6
rs66818723	16:29887215	T/C	SEZ6L2	intron	0.969	1.01613	0.0117	0.1722		6
rs71389435	16:29907027	T/C	SEZ6L2	intron	0.818	0.96483	0.0336	0.2859		5
rs74017640	16:29889093	C/G	SEZ6L2	intron	0.675	1.03149	0.0429	0.469		4
rs74017641	16:29895457	T/C	SEZ6L2	intron	0.643	0.95772	0.0420	0.3037		2b
rs74017642	16:29895651	A/G	SEZ6L2	intron	0.647	1.04509	0.0417	0.2898		6
rs74017643	16:29899234	A/G	SEZ6L2	intron	0.646	1.05012	0.0418	0.2415		5
rs74017644	16:29903142	T/C	SEZ6L2	intron	0.648	0.95371	0.0420	0.2581		2c
rs74017645	16:29903392	T/C	SEZ6L2	intron	0.648	1.04875	0.0419	0.2561		4
rs74017646	16:29903815	A/T	SEZ6L2	intron	0.648	0.95352	0.0419	0.2561		4
rs75331747	16:29899123	T/G	SEZ6L2	missense	0.622	0.94544	0.0436	0.1984		5
rs78465001	16:29902105	T/C	SEZ6L2	intron	0.618	1.05517	0.0436	0.2177		7
rs8051833	16:29896390	A/G	SEZ6L2	intron	0.944	0.98020	0.0117	0.08686		7
rs8059343	16:29885154	A/G	SEZ6L2	intron	0.679	0.97200	0.0425	0.5046		7
rs9926856	16:29887801	A/G	SEZ6L2	intron	0.679	0.96609	0.0426	0.4176		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
19855392	Regional	4551 cases; 6391 controls
Reference	Study type	Sample size

eQTL Information