SFXN2

Basic Information

Gene Symbol	SFXN2
Entrez Id	118980
Position	chr10:104474298..104498946
Description	sideroflexin 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10786704	10:104475010	T/G	SFXN2	intron,near-gene-5	0.988	1.01765	0.0117	0.1331		5
rs10786705	10:104477705	A/G	SFXN2	intron	1.000	1.01928	0.0116	0.09928		5
rs10883768	10:104487973	T/C	SFXN2	intron	0.993	1.04938	0.0145	0.0008824		7
rs10883769	10:104494947	C/G	SFXN2	intron	1.000	0.97541	0.0128	0.05167		1b
rs111541823	10:104479135	T/C	SFXN2	intron	0.789	0.85968	0.0426	0.0003804		6
rs111823312	10:104491148	A/G	SFXN2	intron	0.744	0.95686	0.0472	0.3498		7
rs111930640	10:104494569	T/C	SFXN2	intron	0.744	0.95686	0.0472	0.3497		7
rs12259058	10:104484799	A/G	SFXN2	intron	0.987	1.00985	0.0114	0.3897		2b
rs12762176	10:104499232	A/T	SFXN2	near-gene-3	0.998	1.01735	0.0114	0.1321		7
rs12771656	10:104479165	A/T	SFXN2	intron	0.976	0.99332	0.0117	0.5646		5
rs12775883	10:104485301	A/G	SFXN2	intron	0.990	0.99025	0.0114	0.3927		7
rs12783444	10:104480659	A/G	SFXN2	intron	0.995	0.99045	0.0114	0.4014		5
rs140285267	10:104475632	A/G	SFXN2	intron,near-gene-5	0.656	0.96012	0.0666	0.5409		-
rs141400235	10:104498117	T/G	SFXN2	ncRNA,untranslated-3	0.741	1.19017	0.0643	0.006773		-
rs141967860	10:104476615	T/C	SFXN2	intron,near-gene-5	0.741	1.13258	0.0607	0.04039		-
rs143880630	10:104498297	A/G	SFXN2	ncRNA,untranslated-3	0.714	1.06727	0.0466	0.1623		-
rs144125267	10:104477165	A/G	SFXN2	intron,near-gene-5	0.779	0.82878	0.0588	0.001415		-
rs147218095	10:104490868	A/T	SFXN2	intron	0.715	0.94563	0.0670	0.4047		-
rs148331040	10:104493739	C/G	SFXN2	intron	0.820	1.04739	0.0514	0.3683		-
rs17711717	10:104498846	T/C	SFXN2	ncRNA,untranslated-3	0.950	1.15917	0.0398	0.0002081		4
rs17784294	10:104479385	A/C	SFXN2	intron	0.998	0.99084	0.0114	0.4206		1f
rs188411559	10:104493919	A/G	SFXN2	intron	0.747	1.10407	0.0576	0.08594		-
rs189977457	10:104498331	T/G	SFXN2	ncRNA,untranslated-3	0.997	1.03293	0.0222	0.1439		-
rs2244254	10:104489011	C/G	SFXN2	intron	1.000	0.97619	0.0125	0.05341		1f
rs2244257	10:104488914	A/G	SFXN2	intron	0.990	1.00511	0.0413	0.9017		3a
rs2244258	10:104488900	A/T	SFXN2	intron	1.000	1.02398	0.0125	0.05765		1f
rs2244524	10:104486974	T/C	SFXN2	intron	0.988	1.00000	0.0107	1		5
rs2244647	10:104486304	C/G	SFXN2	intron	0.991	0.98886	0.0126	0.3735		2b
rs2254198	10:104499220	T/C	SFXN2	near-gene-3	0.992	1.00582	0.0412	0.8885		6
rs2265308	10:104491114	T/C	SFXN2	intron	1.000	1.02439	0.0125	0.0534		6
rs2265309	10:104487871	T/C	SFXN2	intron	0.987	0.96089	0.0106	0.0001627		7
rs2489741	10:104479875	A/G	SFXN2	intron	0.994	0.99213	0.0108	0.4636		7
rs2778036	10:104485725	A/G	SFXN2	intron	0.986	1.03004	0.0117	0.0116		6
rs2778037	10:104492707	C/G	SFXN2	intron	1.000	0.97619	0.0125	0.05381		6
rs2863719	10:104493676	A/G	SFXN2	intron	1.000	1.02532	0.0128	0.05068		6
rs2902547	10:104482331	A/G	SFXN2	intron	0.996	1.01898	0.0116	0.1049		7
rs2902548	10:104487382	T/C	SFXN2	intron	0.954	0.95581	0.0143	0.001526		1f
rs3802676	10:104491702	A/G	SFXN2	intron	1.000	1.02562	0.0128	0.0483		6
rs61869251	10:104496654	A/G	SFXN2	intron	1.000	1.02912	0.0116	0.01357		7
rs61869252	10:104496658	T/C	SFXN2	intron	0.992	0.97971	0.0125	0.1007		7
rs78400164	10:104493432	T/C	SFXN2	intron	0.734	1.04603	0.0424	0.2884		7
rs79981445	10:104494977	T/C	SFXN2	intron	0.886	0.84764	0.0446	0.0002123		4
rs9419938	10:104496859	T/C	SFXN2	intron	0.994	1.03025	0.0117	0.01055		7
rs9645569	10:104496598	A/G	SFXN2	intron	0.923	0.96117	0.0151	0.008664		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information