SLC38A7

Basic Information

Gene Symbol	SLC38A7
Entrez Id	55238
Position	chr16:58700298..58718674
Description	solute carrier family 38, member 7
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs111729089	16:58702146	A/C	SLC38A7	intron	0.991	0.90810	0.0243	0.00007542		7
rs112711550	16:58714333	A/T	SLC38A7	intron	0.759	1.04123	0.0453	0.3728		5
rs117098548	16:58714417	A/G	SLC38A7	intron	0.640	0.92691	0.0703	0.2801		7
rs117588596	16:58708047	T/C	SLC38A7	intron	0.944	0.98147	0.0307	0.5416		7
rs117711557	16:58699062	T/C	SLC38A7	untranslated-3	0.982	0.99293	0.0541	0.8951		5
rs118007701	16:58716538	A/C	SLC38A7	intron	0.984	0.94233	0.0339	0.07971		6
rs12448028	16:58708420	A/C	SLC38A7	intron	0.990	1.00511	0.0145	0.7249		7
rs12598355	16:58703776	C/G	SLC38A7	intron	0.983	1.05601	0.0167	0.001078		7
rs12598867	16:58716641	T/C	SLC38A7	intron	0.979	0.99980	0.0106	0.9816		7
rs12920787	16:58703582	A/C	SLC38A7	intron	0.988	0.90837	0.0245	0.00008918		6
rs12922357	16:58707376	C/G	SLC38A7	intron	0.968	0.98669	0.0107	0.2086		7
rs12923842	16:58716776	T/C	SLC38A7	intron	0.993	0.98985	0.0134	0.4478		6
rs12926781	16:58707328	T/C	SLC38A7	intron	0.977	1.04477	0.0149	0.003194		6
rs12934244	16:58711649	T/C	SLC38A7	intron	0.999	0.99035	0.0133	0.4678		5
rs12935121	16:58705662	T/C	SLC38A7	intron	0.994	0.99233	0.0106	0.4649		6
rs146807074	16:58718188	T/C	SLC38A7	intron	0.720	0.96002	0.0452	0.3667		-
rs150934149	16:58702860	T/G	SLC38A7	intron	0.989	0.93445	0.0158	0.00001868		-
rs154468	16:58718753	C/G	SLC38A7	near-gene-5	0.745	1.01491	0.0325	0.6483		4
rs16960359	16:58704496	A/G	SLC38A7	intron	0.984	1.05654	0.0166	0.0009434		5
rs184332916	16:58700190	T/C	SLC38A7	near-gene-3,untranslated-3	0.668	1.02819	0.0523	0.5945		-
rs188426281	16:58700253	A/G	SLC38A7	near-gene-3,untranslated-3	0.984	0.99790	0.0541	0.9695		-
rs2280398	16:58712130	T/C	SLC38A7	intron	0.989	1.04415	0.0161	0.007343		7
rs2280399	16:58711532	T/G	SLC38A7	intron	0.989	1.04436	0.0161	0.007129		5
rs28500769	16:58714819	C/G	SLC38A7	intron	0.994	0.98373	0.0122	0.1801		7
rs28653142	16:58714685	T/G	SLC38A7	intron	0.994	1.01633	0.0122	0.1844		7
rs3784911	16:58703616	T/C	SLC38A7	intron	0.982	1.05643	0.0167	0.0009812		7
rs4784964	16:58700803	T/C	SLC38A7	near-gene-3,untranslated-3	0.989	0.93445	0.0158	0.00001868		5
rs4784965	16:58700827	T/G	SLC38A7	near-gene-3,untranslated-3	0.989	0.93389	0.0158	0.00001596		5
rs4784966	16:58715082	A/G	SLC38A7	intron	0.978	1.06567	0.0163	0.0001002		7
rs4784967	16:58715127	A/G	SLC38A7	intron	0.978	1.06545	0.0163	0.0001038		7
rs4784968	16:58715169	T/G	SLC38A7	intron	0.973	1.06535	0.0163	0.0001055		5
rs59234479	16:58707628	A/G	SLC38A7	intron	0.981	1.04530	0.0162	0.006363		7
rs62065309	16:58699365	T/C	SLC38A7	untranslated-3	0.833	1.01643	0.0514	0.7519		5
rs71389034	16:58716442	T/C	SLC38A7	intron	0.976	0.93772	0.0163	0.0000835		7
rs7198514	16:58714503	T/C	SLC38A7	intron	0.997	0.98866	0.0133	0.3921		7
rs7201166	16:58710511	T/C	SLC38A7	intron	0.996	0.98590	0.0113	0.2087		7
rs74515664	16:58714695	A/G	SLC38A7	intron	0.993	1.09955	0.0243	0.00009651		7
rs75073067	16:58706326	T/C	SLC38A7	intron	0.977	1.05834	0.0339	0.09459		5
rs75135583	16:58710423	T/C	SLC38A7	intron	0.992	1.10065	0.0243	0.00007958		5
rs75623889	16:58715207	A/G	SLC38A7	intron	0.824	1.10076	0.0345	0.005413		5
rs76450249	16:58708717	T/C	SLC38A7	intron	0.992	1.10076	0.0243	0.00007816		5
rs76494749	16:58708709	A/G	SLC38A7	intron	0.978	1.05887	0.0339	0.09183		5
rs76503074	16:58719007	A/G	SLC38A7	near-gene-5	0.988	0.99471	0.0525	0.92		2b
rs76733922	16:58702541	C/G	SLC38A7	intron	0.952	1.05855	0.0165	0.0005628		7
rs78067264	16:58717572	A/G	SLC38A7	intron	0.985	1.06046	0.0339	0.08317		5
rs78768619	16:58708234	A/G	SLC38A7	intron	0.971	1.10484	0.0252	0.00007464		7
rs80327081	16:58699482	C/G	SLC38A7	untranslated-3	0.989	1.07090	0.0159	0.00001562		5
rs8044347	16:58703359	A/G	SLC38A7	intron	0.995	0.99064	0.0106	0.375		5
rs8045177	16:58712038	T/C	SLC38A7	intron	0.989	1.01572	0.0111	0.1573		7
rs8048458	16:58716536	A/T	SLC38A7	intron	0.973	1.00200	0.0106	0.8545		7
rs8052200	16:58707764	T/C	SLC38A7	intron	0.977	1.04425	0.0149	0.003586		6
rs8052323	16:58701796	A/G	SLC38A7	intron	0.989	0.93445	0.0158	0.00001887		6
rs8052986	16:58716660	T/C	SLC38A7	intron	0.961	0.99740	0.0107	0.8076		6
rs8058151	16:58714943	A/T	SLC38A7	intron	0.978	1.07154	0.0170	0.00004946		5
rs8058969	16:58718930	A/G	SLC38A7	near-gene-5	1.000	1.00210	0.0105	0.8407		2b
rs8063838	16:58703708	A/G	SLC38A7	intron	0.987	0.93072	0.0160	7.172E-6		7
rs9673208	16:58702547	T/C	SLC38A7	intron	0.959	0.98748	0.0108	0.2399		7
rs9673706	16:58702346	C/G	SLC38A7	intron	0.989	1.07004	0.0158	0.00001895		7
rs9806843	16:58704861	A/G	SLC38A7	intron	0.996	1.01552	0.0107	0.1518		5
rs9921121	16:58706745	T/C	SLC38A7	intron	0.994	1.00894	0.0106	0.4011		7
rs9923128	16:58703966	A/G	SLC38A7	intron	1.000	0.99084	0.0105	0.383		7
rs9934098	16:58709639	C/G	SLC38A7	intron	0.994	1.00914	0.0106	0.3877		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information