SLC39A8

Basic Information

Gene Symbol	SLC39A8
Entrez Id	64116
Position	chr4:103172198..103266655
Description	solute carrier family 39 (zinc transporter), member 8
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10014145	4:103200577	A/G	SLC39A8	intron	1.000	0.97443	0.0114	0.02264		6
rs10017306	4:103225947	A/T	SLC39A8	intron	0.958	0.99392	0.0110	0.5829		6
rs1004606	4:103245045	A/C	SLC39A8	intron	0.886	1.02511	0.0257	0.3329		7
rs10049581	4:103192893	T/C	SLC39A8	intron	0.996	1.03128	0.0181	0.08912		7
rs10461136	4:103253946	T/G	SLC39A8	intron	0.992	0.98886	0.0114	0.3249		7
rs10489121	4:103206240	A/G	SLC39A8	intron	0.982	1.03231	0.0183	0.08212		7
rs10489122	4:103206090	A/G	SLC39A8	intron	0.984	0.97658	0.0111	0.03348		6
rs10489123	4:103205769	A/G	SLC39A8	intron	0.994	1.01076	0.0186	0.5636		7
rs10489124	4:103189437	T/C	SLC39A8	intron	0.869	0.99452	0.0337	0.8694		7
rs11097772	4:103215245	A/G	SLC39A8	intron	0.979	1.02480	0.0112	0.02842		6
rs11097773	4:103225513	T/C	SLC39A8	coding-synon	0.981	0.97385	0.0141	0.06118		6
rs112519623	4:103184239	A/G	SLC39A8	intron,missense	0.827	1.09275	0.0446	0.04674		3a
rs112673097	4:103202927	A/G	SLC39A8	intron	0.812	1.06226	0.0535	0.2585		4
rs113926309	4:103191137	T/C	SLC39A8	intron	0.734	0.97385	0.0466	0.5704		6
rs114473485	4:103251464	T/C	SLC39A8	intron	0.623	1.09505	0.0429	0.0343		7
rs115510548	4:103198819	C/G	SLC39A8	intron	0.996	0.96918	0.0182	0.08497		7
rs115980427	4:103179168	T/G	SLC39A8	intron	0.650	1.01217	0.0313	0.6978		2b
rs116507282	4:103219717	A/G	SLC39A8	intron	0.889	0.97502	0.0491	0.6061		7
rs116538600	4:103251473	T/C	SLC39A8	intron	0.857	1.01867	0.0387	0.6329		6
rs116595123	4:103224594	T/C	SLC39A8	intron	0.647	0.97025	0.0405	0.4559		7
rs116767188	4:103250964	T/G	SLC39A8	intron	0.975	1.00140	0.0182	0.9395		6
rs116767419	4:103188478	A/G	SLC39A8	intron	0.895	1.02747	0.0459	0.5547		6
rs11736123	4:103233611	C/G	SLC39A8	intron	0.966	0.97453	0.0118	0.02842		7
rs11941736	4:103205646	C/G	SLC39A8	intron	0.994	0.98778	0.0137	0.3689		7
rs12649383	4:103215239	A/C	SLC39A8	intron	0.938	1.02337	0.0119	0.05206		7
rs13103835	4:103232168	T/C	SLC39A8	intron	0.983	0.95753	0.0112	0.0001084		7
rs13105581	4:103228830	T/C	SLC39A8	intron	0.959	1.09516	0.0205	8.959E-6		7
rs13107325	4:103188709	T/C	SLC39A8	missense	0.944	1.16404	0.0215	1.536E-12		7
rs13114343	4:103189416	A/G	SLC39A8	intron	0.999	1.01745	0.0107	0.1052		7
rs13118152	4:103235640	A/G	SLC39A8	intron	0.974	1.04029	0.0133	0.003012		7
rs13126885	4:103173749	T/C	SLC39A8	untranslated-3	1.000	1.00682	0.0106	0.5229		6
rs13128485	4:103253183	A/T	SLC39A8	intron	0.997	1.00692	0.0111	0.5342		6
rs13135092	4:103198082	A/G	SLC39A8	intron	0.928	0.86528	0.0208	3.6E-12		6
rs138575905	4:103265826	T/C	SLC39A8	untranslated-5	0.708	0.93230	0.0489	0.1517		-
rs139036380	4:103198466	A/G	SLC39A8	intron	0.977	1.01349	0.0114	0.2426		-
rs141978356	4:103224214	A/G	SLC39A8	intron	0.739	0.97258	0.0538	0.6056		-
rs144401529	4:103194531	T/C	SLC39A8	intron	0.993	1.01725	0.0110	0.1196		-
rs146529422	4:103188494	T/C	SLC39A8	intron	0.685	1.09472	0.0616	0.1415		-
rs146887225	4:103252817	A/T	SLC39A8	intron	0.878	1.03004	0.0617	0.6316		-
rs148026569	4:103213069	T/C	SLC39A8	intron	0.840	0.99571	0.0396	0.9131		-
rs149313226	4:103247546	A/G	SLC39A8	intron,near-gene-5	0.974	1.00090	0.0182	0.962		-
rs149356990	4:103248332	T/C	SLC39A8	intron	0.617	0.98946	0.0596	0.8593		-
rs149907535	4:103195128	A/T	SLC39A8	intron	0.715	1.03894	0.0480	0.4263		-
rs151253114	4:103187335	A/G	SLC39A8	intron	0.765	1.06439	0.0496	0.208		-
rs151368	4:103181113	A/T	SLC39A8	intron	0.999	0.99173	0.0126	0.511		1f
rs151369	4:103176770	T/C	SLC39A8	intron	0.999	0.99213	0.0126	0.5335		2b
rs151370	4:103174491	A/G	SLC39A8	untranslated-3	1.010	0.99362	0.0106	0.5441		5
rs151372	4:103174196	T/C	SLC39A8	untranslated-3	0.999	1.00773	0.0126	0.5419		6
rs151388	4:103182231	T/C	SLC39A8	intron	0.997	1.00793	0.0126	0.53		7
rs151390	4:103183510	T/C	SLC39A8	intron,untranslated-3	0.982	1.03221	0.0122	0.009073		5
rs151394	4:103184652	C/G	SLC39A8	intron	0.999	1.00894	0.0126	0.4818		7
rs151395	4:103186708	T/C	SLC39A8	intron	0.997	0.99173	0.0126	0.5118		7
rs151397	4:103186797	T/G	SLC39A8	intron	0.995	1.00823	0.0126	0.5163		7
rs151398	4:103187076	C/G	SLC39A8	intron	0.993	0.99164	0.0126	0.5046		6
rs151399	4:103187562	T/C	SLC39A8	intron	0.991	1.01045	0.0126	0.4111		6
rs151400	4:103187612	A/C	SLC39A8	intron	0.994	1.01268	0.0126	0.3201		6
rs151401	4:103190128	A/G	SLC39A8	intron	1.000	0.95256	0.0128	0.0001439		6
rs151402	4:103190486	A/G	SLC39A8	intron	1.000	1.00702	0.0112	0.5318		6
rs151403	4:103191447	A/G	SLC39A8	intron	1.000	0.99233	0.0113	0.4963		6
rs151406	4:103194264	T/C	SLC39A8	intron	1.000	1.04980	0.0128	0.0001423		7
rs1545744	4:103238966	A/T	SLC39A8	intron	0.984	1.02204	0.0141	0.1211		7
rs17032286	4:103174653	T/G	SLC39A8	intron	0.842	0.99124	0.0335	0.7926		7
rs17032290	4:103174728	T/C	SLC39A8	intron	0.882	1.05243	0.0272	0.06006		6
rs17032321	4:103177480	C/G	SLC39A8	intron	0.860	0.95993	0.0338	0.2268		4
rs17032332	4:103182661	T/G	SLC39A8	intron,near-gene-3	0.982	0.98541	0.0115	0.2007		7
rs17032357	4:103182616	A/C	SLC39A8	intron,near-gene-3	0.980	1.01552	0.0115	0.1803		6
rs17032400	4:103190229	T/C	SLC39A8	intron	0.994	1.02665	0.0106	0.01268		6
rs17032436	4:103207765	T/C	SLC39A8	intron	0.771	1.02265	0.0273	0.4125		6
rs17212693	4:103258848	A/G	SLC39A8	intron	0.978	1.00100	0.0181	0.9562		7
rs17225702	4:103189902	A/G	SLC39A8	intron	0.995	1.03138	0.0183	0.091		7
rs17226148	4:103205668	A/G	SLC39A8	intron	0.987	1.03200	0.0183	0.08502		6
rs17278473	4:103243101	T/C	SLC39A8	intron	1.000	1.00612	0.0111	0.5817		1f
rs173048	4:103213362	A/C	SLC39A8	intron	0.988	0.96137	0.0115	0.0006253		6
rs17823175	4:103176308	T/C	SLC39A8	intron	0.982	0.99035	0.0176	0.5806		7
rs17823966	4:103189036	A/G	SLC39A8	coding-synon	0.940	0.94554	0.0283	0.04762		7
rs17824524	4:103206152	T/C	SLC39A8	intron	0.999	1.00763	0.0186	0.683		7
rs182506874	4:103241448	T/C	SLC39A8	intron	0.871	0.95352	0.0579	0.4105		-
rs182597464	4:103241538	A/T	SLC39A8	intron	0.835	0.99392	0.0150	0.6865		-
rs188950086	4:103241552	A/T	SLC39A8	intron	0.774	1.04467	0.0136	0.00133		-
rs192569459	4:103241523	A/G	SLC39A8	intron	0.708	1.00531	0.0243	0.8272		-
rs193116540	4:103241581	A/G	SLC39A8	intron	0.749	0.95993	0.0138	0.003005		-
rs2033899	4:103215536	T/C	SLC39A8	intron	0.977	0.98600	0.0185	0.4476		7
rs2119213	4:103203853	T/C	SLC39A8	intron	0.989	1.01969	0.0110	0.07622		6
rs2165265	4:103203500	T/G	SLC39A8	intron	0.994	1.01857	0.0110	0.09383		5
rs2165266	4:103208891	C/G	SLC39A8	intron	0.983	0.97648	0.0111	0.03223		6
rs2298752	4:103177071	A/G	SLC39A8	intron	1.000	0.99980	0.0130	0.9866		7
rs233804	4:103212916	A/C	SLC39A8	intron	0.997	1.03894	0.0115	0.0008736		6
rs233805	4:103212864	T/G	SLC39A8	intron	0.998	1.03884	0.0115	0.000891		6
rs233809	4:103212430	T/G	SLC39A8	intron	0.998	1.03935	0.0115	0.0007662		7
rs233810	4:103211903	T/C	SLC39A8	intron	0.991	1.04530	0.0128	0.0005141		7
rs233820	4:103222188	C/G	SLC39A8	intron	0.836	0.98432	0.0118	0.1824		7
rs233821	4:103204358	A/G	SLC39A8	intron	0.988	0.96754	0.0110	0.002765		7
rs233823	4:103203945	A/G	SLC39A8	intron	0.992	1.05064	0.0129	0.0001218		6
rs233825	4:103203250	A/G	SLC39A8	intron	0.997	0.97346	0.0114	0.01864		7
rs233826	4:103203228	T/C	SLC39A8	intron	0.989	0.98995	0.0127	0.423		6
rs233827	4:103201821	T/C	SLC39A8	intron	1.000	1.02727	0.0108	0.01268		7
rs28505163	4:103201122	A/G	SLC39A8	intron	0.995	1.03107	0.0181	0.09155		7
rs34663993	4:103252014	A/G	SLC39A8	intron	1.000	1.00371	0.0116	0.7496		6
rs35411892	4:103228734	T/C	SLC39A8	coding-synon	0.979	1.02583	0.0141	0.07082		7
rs36003008	4:103227284	T/C	SLC39A8	intron	0.949	0.99850	0.0176	0.9335		7
rs389974	4:103215347	T/C	SLC39A8	intron	0.969	0.99820	0.0126	0.883		7
rs390878	4:103213242	T/C	SLC39A8	intron	0.972	1.00070	0.0125	0.953		6
rs41275737	4:103225704	T/C	SLC39A8	intron	0.642	0.99273	0.0330	0.826		6
rs41275739	4:103228976	A/G	SLC39A8	intron	0.951	1.00200	0.0176	0.9086		7
rs4146610	4:103265177	T/C	SLC39A8	intron	1.000	0.98324	0.0173	0.3273		3a
rs426442	4:103205295	C/G	SLC39A8	intron	0.971	0.99571	0.0126	0.7301		7
rs438803	4:103173654	T/C	SLC39A8	untranslated-3	1.010	0.99352	0.0106	0.5426		7
rs444943	4:103173564	A/T	SLC39A8	untranslated-3	1.000	1.00672	0.0106	0.5254		6
rs4476601	4:103179173	T/G	SLC39A8	intron	0.999	0.97258	0.0110	0.01182		2b
rs4588460	4:103212837	T/C	SLC39A8	intron	0.995	0.99084	0.0186	0.6199		6
rs460026	4:103173058	T/C	SLC39A8	untranslated-3	1.000	0.99352	0.0106	0.5409		6
rs463373	4:103173173	T/C	SLC39A8	untranslated-3	0.995	0.99035	0.0127	0.4454		6
rs465144	4:103172201	C/G	SLC39A8	untranslated-3	1.010	1.00652	0.0106	0.5379		6
rs4698843	4:103182636	A/G	SLC39A8	intron,near-gene-3	0.998	0.99183	0.0126	0.518		7
rs4698844	4:103217980	T/C	SLC39A8	intron	0.981	0.97609	0.0111	0.02966		1f
rs4698845	4:103218327	T/C	SLC39A8	intron	0.981	1.02470	0.0111	0.02814		7
rs4699006	4:103190828	C/G	SLC39A8	intron	0.994	0.97385	0.0106	0.01204		6
rs4699011	4:103229845	T/C	SLC39A8	intron	0.983	1.02573	0.0141	0.07227		7
rs4699012	4:103249884	A/G	SLC39A8	intron	0.999	1.00401	0.0110	0.7184		6
rs4699013	4:103251513	T/C	SLC39A8	intron	0.997	1.01918	0.0136	0.1636		7
rs57965291	4:103220206	A/G	SLC39A8	intron	0.763	0.98817	0.0255	0.6408		6
rs58321370	4:103174117	T/C	SLC39A8	untranslated-3	0.985	0.97951	0.0115	0.07276		7
rs58379650	4:103176740	T/G	SLC39A8	intron	1.000	0.99930	0.0130	0.9596		4
rs59814792	4:103213058	T/G	SLC39A8	intron	0.970	1.03097	0.0184	0.09688		6
rs60690742	4:103210521	A/G	SLC39A8	intron	0.988	0.98689	0.0138	0.336		7
rs62327888	4:103172311	T/G	SLC39A8	untranslated-3	0.978	0.99114	0.0175	0.6097		7
rs62327889	4:103172826	T/C	SLC39A8	untranslated-3	1.010	0.99900	0.0130	0.9415		5
rs62327912	4:103176039	T/C	SLC39A8	intron	1.000	1.00080	0.0130	0.953		6
rs62327916	4:103187146	T/G	SLC39A8	intron	0.971	1.01147	0.0115	0.32		6
rs62327945	4:103207077	A/G	SLC39A8	intron	0.993	0.98896	0.0187	0.5542		4
rs62327946	4:103207968	A/G	SLC39A8	intron	0.990	1.00995	0.0187	0.5964		7
rs62327949	4:103216782	A/G	SLC39A8	intron	0.980	1.02439	0.0111	0.03031		5
rs62327953	4:103228357	C/G	SLC39A8	intron	0.966	0.97590	0.0117	0.03789		5
rs62327954	4:103231927	A/G	SLC39A8	intron	0.937	1.01979	0.0172	0.2543		7
rs62327955	4:103233672	T/G	SLC39A8	intron	0.772	0.95466	0.0561	0.4073		6
rs62327956	4:103234413	A/T	SLC39A8	intron	0.971	1.02614	0.0116	0.02615		7
rs62327959	4:103253056	A/G	SLC39A8	intron	0.999	1.01755	0.0173	0.3126		6
rs62329460	4:103259561	T/C	SLC39A8	intron	0.995	1.01755	0.0174	0.3183		7
rs62329461	4:103261217	A/T	SLC39A8	intron	1.000	0.98324	0.0173	0.328		5
rs62329462	4:103264105	T/C	SLC39A8	intron	1.000	0.98265	0.0173	0.3113		2c
rs67152947	4:103231262	C/G	SLC39A8	intron	0.954	0.99900	0.0176	0.9537		7
rs67529886	4:103225116	A/G	SLC39A8	intron	0.945	0.99810	0.0177	0.9126		6
rs68103113	4:103241948	A/T	SLC39A8	intron	0.851	1.04102	0.0137	0.003308		6
rs6813511	4:103179268	T/G	SLC39A8	intron	0.819	0.93857	0.0280	0.02348		2b
rs6822371	4:103233207	A/C	SLC39A8	intron	0.987	1.04362	0.0112	0.0001365		5
rs6825874	4:103208632	A/G	SLC39A8	intron	0.993	0.99213	0.0187	0.6728		6
rs6826958	4:103209043	A/C	SLC39A8	intron	0.993	1.00894	0.0187	0.634		7
rs6829701	4:103227073	A/G	SLC39A8	intron	0.966	0.97531	0.0117	0.03295		7
rs6832846	4:103181749	A/G	SLC39A8	intron	0.999	1.00833	0.0126	0.5089		1f
rs6844796	4:103254016	A/C	SLC39A8	intron	1.000	0.98886	0.0114	0.3225		6
rs6848517	4:103229362	C/G	SLC39A8	intron	0.964	0.97746	0.0116	0.04909		4
rs6850893	4:103254421	A/G	SLC39A8	intron	1.000	0.98305	0.0173	0.3216		7
rs6855535	4:103236295	A/G	SLC39A8	intron	0.984	1.02132	0.0141	0.1344		7
rs72692219	4:103207425	C/G	SLC39A8	intron	0.980	1.02224	0.0111	0.0489		6
rs72692221	4:103208244	A/G	SLC39A8	intron	0.994	1.00914	0.0187	0.625		7
rs72692226	4:103213879	A/G	SLC39A8	intron	0.642	0.99521	0.0441	0.9138		5
rs72692236	4:103221459	T/C	SLC39A8	intron	0.641	0.97045	0.0490	0.54		7
rs72692237	4:103221638	T/G	SLC39A8	intron	0.727	0.99243	0.0195	0.6988		7
rs72692239	4:103224388	T/C	SLC39A8	intron	0.952	1.00431	0.0188	0.8167		7
rs72692248	4:103234626	A/G	SLC39A8	intron	0.928	1.03262	0.0159	0.04334		6
rs72692249	4:103235173	A/G	SLC39A8	intron	0.863	0.99223	0.0238	0.7447		7
rs72692251	4:103236265	A/G	SLC39A8	intron	0.957	0.99860	0.0182	0.9377		6
rs72692260	4:103254262	A/G	SLC39A8	intron	0.963	1.03015	0.0261	0.2546		7
rs72692261	4:103262478	A/G	SLC39A8	intron	0.997	1.01837	0.0136	0.1832		4
rs72692262	4:103267164	A/G	SLC39A8	near-gene-5	0.977	1.00190	0.0181	0.9162		2b
rs72924805	4:103173900	C/G	SLC39A8	untranslated-3	0.862	0.95954	0.0337	0.2208		7
rs73834752	4:103230847	T/C	SLC39A8	intron	0.808	0.99164	0.0523	0.8718		7
rs73836548	4:103174425	T/C	SLC39A8	untranslated-3	0.882	1.05264	0.0272	0.0594		7
rs73836551	4:103178952	T/C	SLC39A8	intron	0.883	0.95180	0.0271	0.0682		2b
rs74665237	4:103193660	T/C	SLC39A8	intron	0.998	0.96977	0.0183	0.09288		5
rs74877665	4:103227993	T/C	SLC39A8	intron	0.911	1.01035	0.0426	0.809		6
rs75829635	4:103244470	A/G	SLC39A8	intron	0.859	0.98157	0.0274	0.4961		7
rs75944409	4:103219050	A/G	SLC39A8	intron	0.890	0.95858	0.0198	0.03239		7
rs7681171	4:103179275	T/G	SLC39A8	intron	0.974	0.98817	0.0175	0.4972		2b
rs77160456	4:103226969	T/C	SLC39A8	intron	0.832	0.93491	0.0261	0.009955		6
rs77378426	4:103211420	A/G	SLC39A8	intron	0.978	0.97054	0.0183	0.1027		7
rs77838078	4:103206597	T/C	SLC39A8	intron	0.981	0.97074	0.0183	0.1049		5
rs77855778	4:103203482	T/G	SLC39A8	intron	0.779	1.02020	0.0169	0.2363		5
rs78177294	4:103249153	A/G	SLC39A8	intron	0.883	1.02450	0.0257	0.3464		7
rs79276766	4:103206829	A/T	SLC39A8	intron	0.980	1.02994	0.0183	0.1071		7
rs79411313	4:103214942	T/G	SLC39A8	intron	0.742	0.99084	0.0323	0.7761		7
rs79747645	4:103266480	A/G	SLC39A8	intron,near-gene-5	0.740	0.89261	0.0462	0.0139		4
rs79774301	4:103186915	A/C	SLC39A8	intron	0.713	0.91870	0.0616	0.1687		7
rs79969194	4:103206711	T/G	SLC39A8	intron	0.980	0.97074	0.0183	0.1045		5
rs80137092	4:103172206	T/C	SLC39A8	untranslated-3	0.904	1.01694	0.0213	0.4308		6
rs80176743	4:103189686	T/C	SLC39A8	intron	0.994	0.96967	0.0183	0.09209		5
rs9992479	4:103192243	A/T	SLC39A8	intron	0.994	0.97365	0.0106	0.01155		6
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information