SLC7A6

Basic Information

Gene Symbol	SLC7A6
Entrez Id	9057
Position	chr16:68298423..68335722
Description	solute carrier family 7 (amino acid transporter light chain, y+L system), member 6
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1075851	16:68296529	T/C	SLC7A6	near-gene-5	0.987	0.96098	0.0108	0.0002282		7
rs10852440	16:68317061	T/C	SLC7A6	intron	0.988	1.03386	0.0107	0.001966		1f
rs112086775	16:68310917	A/C	SLC7A6	intron	0.987	0.93351	0.0170	0.00004988		6
rs116580887	16:68299502	A/G	SLC7A6	intron	0.985	1.08774	0.0264	0.001428		3a
rs117417273	16:68299697	T/C	SLC7A6	intron	0.985	1.08883	0.0264	0.001246		4
rs117930325	16:68317345	T/C	SLC7A6	intron	0.631	1.03707	0.0536	0.4969		5
rs12102971	16:68298024	C/G	SLC7A6	near-gene-5	0.979	0.96618	0.0108	0.001428		2b
rs12162068	16:68298193	A/C	SLC7A6	near-gene-5	0.988	0.96657	0.0108	0.00156		4
rs12447119	16:68297928	A/G	SLC7A6	near-gene-5	0.995	1.07208	0.0169	0.0000379		4
rs12596500	16:68299771	A/G	SLC7A6	intron	0.969	1.08231	0.0189	0.00002764		4
rs12924125	16:68299781	T/C	SLC7A6	intron	0.996	1.03479	0.0107	0.001442		4
rs138944215	16:68313039	A/G	SLC7A6	intron	0.976	1.08058	0.0240	0.00123		-
rs141791677	16:68311260	A/G	SLC7A6	intron	0.713	0.92459	0.0452	0.08239		-
rs146708772	16:68316788	A/T	SLC7A6	intron	0.984	1.08546	0.0243	0.0007536		-
rs148060885	16:68306075	A/C	SLC7A6	intron,near-gene-5	0.815	1.09823	0.0446	0.03589		-
rs189596351	16:68312680	T/C	SLC7A6	intron	0.840	1.02757	0.0368	0.4592		-
rs36010241	16:68306037	T/C	SLC7A6	intron,near-gene-5	0.999	0.96686	0.0107	0.00165		7
rs3785111	16:68309971	A/T	SLC7A6	intron	0.997	1.03365	0.0107	0.001994		4
rs3961283	16:68317636	A/G	SLC7A6	intron	0.984	1.00914	0.0120	0.4507		5
rs4783552	16:68310312	T/C	SLC7A6	intron	1.000	1.01908	0.0109	0.08393		1f
rs4783610	16:68310457	C/G	SLC7A6	intron	0.999	0.98128	0.0109	0.083		6
rs72790400	16:68301727	A/G	SLC7A6	intron	0.863	0.92496	0.0403	0.05305		2b
rs74409454	16:68316015	A/G	SLC7A6	intron	0.985	1.08567	0.0243	0.0007288		4
rs77517043	16:68301410	A/G	SLC7A6	intron	0.960	1.05243	0.0184	0.00552		7
rs8056893	16:68304392	A/C	SLC7A6	intron	0.996	1.00955	0.0120	0.4301		5
rs9888796	16:68297589	T/C	SLC7A6	near-gene-5	0.989	0.99840	0.0121	0.8938		4
rs9888986	16:68297228	A/G	SLC7A6	near-gene-5	0.995	1.06930	0.0168	0.00006485		5
rs9923188	16:68311867	T/G	SLC7A6	intron	0.994	0.96715	0.0107	0.001827		7
rs9925773	16:68312864	A/G	SLC7A6	intron	0.910	0.98531	0.0120	0.2192		7
rs9926893	16:68300964	A/G	SLC7A6	intron	0.986	1.03417	0.0108	0.001773		6
rs9930792	16:68297115	A/C	SLC7A6	near-gene-5	0.994	0.96098	0.0108	0.0002146		5
rs9930908	16:68297058	T/G	SLC7A6	near-gene-5	0.994	0.96079	0.0108	0.0002019		5
rs9933029	16:68303410	A/G	SLC7A6	intron	1.000	1.01816	0.0109	0.09871		1f
rs9935025	16:68307447	T/C	SLC7A6	intron,near-gene-5	0.999	1.03396	0.0107	0.001806		1f
rs9937244	16:68307559	A/T	SLC7A6	intron,near-gene-5	0.997	0.96686	0.0107	0.001682		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information