SREBF1

Basic Information

Gene Symbol	SREBF1
Entrez Id	6720
Position	chr17:17714663..17740325
Description	sterol regulatory element binding transcription factor 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs11078399	17:17728983	A/G	SREBF1	intron	0.965	1.05591	0.0113	1.317E-6		5
rs1108511	17:17726469	T/C	SREBF1	intron	0.984	1.02922	0.0228	0.2063		4
rs114001633	17:17722973	A/G	SREBF1	ncRNA,missense	0.636	0.98896	0.0667	0.8685		4
rs117599491	17:17731981	A/G	SREBF1	intron	0.718	1.00562	0.0297	0.85		6
rs12450799	17:17730201	T/C	SREBF1	intron	0.986	1.05411	0.0110	1.819E-6		2b
rs12601420	17:17721736	T/C	SREBF1	intron	0.860	1.03769	0.0325	0.2546		2b
rs12936927	17:17726965	T/C	SREBF1	intron,near-gene-5	0.944	0.94393	0.0114	3.826E-7		4
rs12938501	17:17737258	A/C	SREBF1	intron	0.996	1.05654	0.0112	8.068E-7		7
rs12941068	17:17737857	A/G	SREBF1	intron	0.795	0.96060	0.0132	0.002356		4
rs12952723	17:17731651	T/C	SREBF1	intron	0.994	1.05707	0.0112	6.671E-7		5
rs12953299	17:17726648	A/G	SREBF1	intron	0.941	1.05201	0.0111	5.157E-6		4
rs13306736	17:17740281	T/C	SREBF1	ncRNA,untranslated-5	0.955	0.94705	0.0112	1.117E-6		4
rs144225515	17:17732781	T/G	SREBF1	intron	0.746	0.92598	0.0456	0.09157		-
rs149965532	17:17735512	T/C	SREBF1	intron	0.907	1.05887	0.0591	0.3329		-
rs185346403	17:17732552	A/C	SREBF1	intron	0.700	0.99283	0.0578	0.9004		-
rs2297508	17:17715317	C/G	SREBF1	ncRNA,untranslated-3	0.968	1.05760	0.0112	6.278E-7		4
rs35367147	17:17730031	A/C	SREBF1	intron	0.921	0.98827	0.0323	0.7157		2b
rs4924821	17:17735952	T/C	SREBF1	intron	0.986	1.05264	0.0110	3.399E-6		5
rs4925115	17:17721457	A/G	SREBF1	intron	0.967	1.05264	0.0112	4.525E-6		5
rs4925116	17:17731200	A/G	SREBF1	intron	0.994	1.05696	0.0112	6.871E-7		2b
rs4925117	17:17736252	A/C	SREBF1	intron	0.885	1.05169	0.0116	0.00001397		6
rs4925118	17:17739163	T/C	SREBF1	intron	0.961	1.05148	0.0177	0.004622		4
rs62064118	17:17727285	A/G	SREBF1	intron,near-gene-5	0.829	0.90068	0.0402	0.009256		2b
rs77370813	17:17738921	T/C	SREBF1	intron	0.963	1.02102	0.0276	0.4497		5
rs78735444	17:17736925	T/G	SREBF1	intron	0.841	1.06567	0.0409	0.12		6
rs8066560	17:17728043	A/G	SREBF1	intron,near-gene-5	0.991	1.05369	0.0111	2.572E-6		5
rs9894257	17:17732319	T/C	SREBF1	intron	0.968	0.95371	0.0112	0.00002138		7
rs9899634	17:17727943	A/T	SREBF1	intron,near-gene-5	0.993	0.94649	0.0112	8.465E-7		1b
rs9902941	17:17733760	T/C	SREBF1	intron	0.996	0.94667	0.0112	8.973E-7		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information