SREBF2

Basic Information

Gene Symbol	SREBF2
Entrez Id	6721
Position	chr22:42229106..42302375
Description	sterol regulatory element binding transcription factor 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs1009544	22:42239348	C/G	SREBF2	intron	0.989	0.96271	0.0160	0.01782		5
rs10222269	22:42250992	A/G	SREBF2	intron	0.747	1.02932	0.0294	0.3255		7
rs111754749	22:42236442	D/I4	SREBF2	intron	1.000	0.95047	0.0176	0.00393		-
rs113110907	22:42252827	C/G	SREBF2	intron	0.657	1.15512	0.0673	0.03222		5
rs113940759	22:42247507	I2/D	SREBF2	intron	0.915	0.96841	0.0170	0.05939		-
rs115157273	22:42238764	T/C	SREBF2	intron	0.833	0.92081	0.0267	0.002045		5
rs117181659	22:42247984	A/G	SREBF2	intron	0.808	0.89458	0.0303	0.0002317		6
rs117459974	22:42288072	A/G	SREBF2	intron	0.624	0.98324	0.0703	0.8096		5
rs117659206	22:42279372	A/G	SREBF2	intron	0.862	1.13928	0.0571	0.02233		7
rs12157312	22:42290177	T/C	SREBF2	intron	0.992	1.06439	0.0195	0.001398		5
rs12165579	22:42278245	A/G	SREBF2	intron	0.991	0.95552	0.0267	0.08891		7
rs12166430	22:42294176	A/G	SREBF2	intron	0.954	1.06078	0.0189	0.001787		5
rs12170228	22:42247695	T/C	SREBF2	intron	0.995	1.04050	0.0107	0.0002009		7
rs12373973	22:42246564	A/T	SREBF2	intron	0.997	1.13417	0.0477	0.008368		7
rs12373989	22:42244034	C/G	SREBF2	intron	0.900	0.88568	0.0451	0.007143		7
rs13055841	22:42279653	A/G	SREBF2	intron	0.842	1.02071	0.0126	0.1052		5
rs133286	22:42262447	A/G	SREBF2	intron	0.999	1.03967	0.0106	0.0002446		6
rs141911719	22:42291679	A/G	SREBF2	intron	0.991	1.06641	0.0197	0.00113		-
rs142436111	22:42270874	C/G	SREBF2	intron	0.809	0.98521	0.0534	0.7798		-
rs143256776	22:42262411	A/G	SREBF2	intron	0.970	1.03087	0.0336	0.3651		-
rs144293050	22:42255774	T/C	SREBF2	intron	0.881	1.11539	0.0600	0.06891		-
rs144846435	22:42289378	T/C	SREBF2	intron	0.980	1.05432	0.0519	0.3084		-
rs145453004	22:42281571	T/G	SREBF2	intron	0.827	0.97521	0.0577	0.6637		-
rs146314226	22:42254918	T/C	SREBF2	intron	0.644	0.85325	0.0663	0.01663		-
rs146427423	22:42235794	A/G	SREBF2	intron	0.994	1.01278	0.0517	0.8054		-
rs148437973	22:42278355	A/G	SREBF2	intron	0.991	1.01633	0.0517	0.7548		-
rs148982064	22:42234663	C/G	SREBF2	intron	0.984	0.99860	0.0320	0.9661		-
rs149025713	22:42259908	T/C	SREBF2	intron	0.677	0.92210	0.0636	0.202		-
rs149121946	22:42248253	A/G	SREBF2	intron	0.992	1.01461	0.0518	0.7794		-
rs149192849	22:42270864	T/C	SREBF2	intron	0.976	1.00491	0.0318	0.8786		-
rs150033986	22:42270817	A/C	SREBF2	intron	0.824	1.01776	0.0552	0.7505		-
rs150105096	22:42256663	A/G	SREBF2	intron	0.995	1.01735	0.0517	0.7393		-
rs150583098	22:42264272	A/G	SREBF2	intron	0.982	1.01755	0.0499	0.7269		-
rs1569451	22:42232291	A/G	SREBF2	intron	1.000	1.01623	0.0114	0.1587		6
rs16985978	22:42239222	T/C	SREBF2	intron	0.994	1.11027	0.0480	0.02941		2a
rs17002706	22:42258577	C/G	SREBF2	intron	0.989	1.04676	0.0180	0.01109		4
rs17002737	22:42282012	T/C	SREBF2	intron	0.984	0.94242	0.0185	0.001333		6
rs17379759	22:42299535	A/G	SREBF2	intron	0.998	1.04687	0.0156	0.003344		3a
rs17848337	22:42300948	A/C	SREBF2	coding-synon,ncRNA	0.992	0.93463	0.0198	0.000627		2b
rs17848346	22:42273462	A/G	SREBF2	intron	0.993	1.04540	0.0268	0.09716		7
rs17848348	22:42292885	T/C	SREBF2	intron	0.991	0.93800	0.0197	0.001174		7
rs182108144	22:42233876	A/G	SREBF2	intron	0.794	1.00030	0.0630	0.9958		-
rs190532327	22:42260327	A/T	SREBF2	intron	0.683	1.02439	0.0229	0.2946		-
rs2157590	22:42301712	T/C	SREBF2	ncRNA,untranslated-3	0.996	1.04697	0.0156	0.003329		5
rs2228313	22:42293140	C/G	SREBF2	ncRNA,missense	0.992	0.93744	0.0197	0.001043		7
rs2228314	22:42276742	C/G	SREBF2	ncRNA,missense	0.978	0.97083	0.0124	0.01689		6
rs2229442	22:42301748	A/G	SREBF2	ncRNA,untranslated-3	0.991	1.07090	0.0197	0.0004948		5
rs2255957	22:42241372	A/G	SREBF2	intron	0.998	0.97258	0.0147	0.05933		7
rs2267438	22:42237565	T/C	SREBF2	intron	1.000	1.01654	0.0114	0.1505		5
rs2267439	22:42237769	T/C	SREBF2	intron	1.000	1.01633	0.0114	0.1573		5
rs2267440	22:42248860	A/G	SREBF2	intron	0.972	1.01613	0.0122	0.1902		6
rs2267441	22:42278566	T/C	SREBF2	intron	0.951	1.03562	0.0173	0.04355		6
rs2267442	22:42280361	A/G	SREBF2	intron	0.947	1.03200	0.0112	0.005036		7
rs2267443	22:42287454	A/G	SREBF2	intron	0.913	1.01949	0.0113	0.0892		5
rs2269657	22:42264269	T/G	SREBF2	intron	0.999	0.96696	0.0121	0.005714		7
rs2269658	22:42280618	T/C	SREBF2	intron	0.994	1.02716	0.0152	0.0793		7
rs2269660	22:42292923	A/G	SREBF2	intron	0.991	0.93782	0.0197	0.001137		6
rs2269662	22:42301014	A/G	SREBF2	intron	0.991	1.07090	0.0197	0.0005116		5
rs2269664	22:42301943	T/C	SREBF2	ncRNA,untranslated-3	0.991	0.93510	0.0198	0.0006915		2b
rs2284082	22:42240797	T/C	SREBF2	intron	1.000	1.01643	0.0114	0.1525		4
rs2284083	22:42252589	C/G	SREBF2	intron	0.989	1.03583	0.0166	0.03382		2b
rs2284084	22:42283075	T/C	SREBF2	intron	0.992	1.02501	0.0153	0.1069		7
rs2284085	22:42283550	T/G	SREBF2	intron	0.972	1.05591	0.0189	0.003942		5
rs2413660	22:42247360	A/G	SREBF2	intron	0.997	1.04164	0.0107	0.0001363		6
rs2413662	22:42260971	C/G	SREBF2	intron	0.989	1.04676	0.0180	0.01109		7
rs28391727	22:42240069	T/C	SREBF2	intron	0.927	0.99293	0.0158	0.6548		6
rs28885520	22:42260329	A/T	SREBF2	intron	0.774	0.96744	0.0179	0.0653		6
rs3045466	22:42265300	I9/D	SREBF2	intron	0.812	0.98837	0.0165	0.4795		-
rs34333405	22:42243926	I2/D	SREBF2	intron	0.911	0.95056	0.0151	0.000774		6
rs34424722	22:42254521	D/I3	SREBF2	intron	0.990	0.95945	0.0267	0.1209		-
rs34587252	22:42246037	A/G	SREBF2	intron	0.991	0.95514	0.0178	0.01008		6
rs41276325	22:42301434	T/C	SREBF2	intron	0.969	1.13997	0.0487	0.007117		5
rs4269017	22:42239938	T/C	SREBF2	intron	1.000	0.95935	0.0107	0.0001005		7
rs4501042	22:42245763	T/C	SREBF2	intron	1.000	1.01623	0.0114	0.1589		6
rs4820447	22:42268721	T/C	SREBF2	intron	0.986	0.95686	0.0180	0.01429		7
rs4822060	22:42233955	A/G	SREBF2	intron	1.000	0.95323	0.0177	0.00677		6
rs4822061	22:42270707	A/C	SREBF2	intron	0.989	0.95313	0.0180	0.007864		6
rs4822062	22:42274287	A/G	SREBF2	intron	0.992	0.95743	0.0180	0.01562		6
rs4822064	22:42279506	C/G	SREBF2	intron	0.932	0.98423	0.0165	0.3369		7
rs4822066	22:42289500	A/G	SREBF2	intron	0.992	0.95609	0.0157	0.004293		5
rs4822067	22:42302311	A/G	SREBF2	ncRNA,untranslated-3	0.996	0.95514	0.0156	0.003307		5
rs59084560	22:42245947	D/I8	SREBF2	intron	0.962	1.04645	0.0127	0.0003426		-
rs59493447	22:42245722	T/G	SREBF2	intron	0.995	0.97297	0.0148	0.06371		6
rs59859018	22:42252180	A/G	SREBF2	intron	0.988	1.04227	0.0267	0.1212		7
rs6002527	22:42297968	T/C	SREBF2	intron	0.980	1.06983	0.0195	0.0005207		2b
rs60386215	22:42256814	T/C	SREBF2	intron	0.992	0.96570	0.0166	0.03507		7
rs60804715	22:42247507	T/G	SREBF2	intron	0.914	0.97307	0.0170	0.1089		6
rs62240960	22:42253589	A/G	SREBF2	intron	0.851	1.04875	0.0286	0.09608		4
rs62240962	22:42259524	T/C	SREBF2	intron	0.876	1.01379	0.0202	0.4958		5
rs62240986	22:42294253	T/G	SREBF2	intron	0.696	1.08480	0.0449	0.06989		6
rs6519292	22:42236193	A/T	SREBF2	intron	0.980	1.02286	0.0114	0.04711		6
rs6519293	22:42245970	A/G	SREBF2	intron	0.998	0.98334	0.0114	0.1418		7
rs6519294	22:42246392	T/C	SREBF2	intron	0.999	1.01654	0.0114	0.1513		7
rs67057013	22:42251123	T/C	SREBF2	intron	0.991	1.04959	0.0178	0.006634		6
rs7286071	22:42249995	T/C	SREBF2	intron	0.959	1.03128	0.0264	0.2425		6
rs7288838	22:42243841	T/C	SREBF2	intron	0.998	0.95562	0.0106	0.00002027		6
rs7292386	22:42252960	A/G	SREBF2	intron	0.991	1.04917	0.0178	0.007068		7
rs7293096	22:42235815	T/C	SREBF2	intron	1.000	1.04991	0.0177	0.005909		7
rs73163373	22:42232588	A/G	SREBF2	intron	0.998	0.97229	0.0147	0.0565		7
rs73163382	22:42251917	C/G	SREBF2	intron	0.986	1.00190	0.0320	0.9519		6
rs73163396	22:42277792	A/C	SREBF2	intron	0.984	0.95256	0.0182	0.007478		7
rs73165104	22:42287203	C/G	SREBF2	intron	0.832	1.03759	0.0286	0.1978		5
rs73165105	22:42287966	T/C	SREBF2	intron	0.902	0.98000	0.0165	0.221		5
rs73165107	22:42289797	T/C	SREBF2	intron	0.992	0.93819	0.0197	0.001214		5
rs73165110	22:42291856	A/G	SREBF2	intron	0.991	0.93772	0.0197	0.00112		6
rs73165115	22:42298165	T/C	SREBF2	intron	0.990	0.93491	0.0198	0.0006709		4
rs73165116	22:42298601	T/C	SREBF2	intron	0.977	0.93361	0.0202	0.000656		5
rs73165117	22:42300248	C/G	SREBF2	intron	0.992	1.06951	0.0198	0.0006732		5
rs73165119	22:42303724	C/G	SREBF2	near-gene-3	0.992	1.06983	0.0198	0.0006376		5
rs73430924	22:42248181	A/G	SREBF2	intron	0.996	1.13383	0.0478	0.008531		6
rs73430926	22:42248282	A/G	SREBF2	intron	0.992	0.88373	0.0486	0.01091		6
rs74278423	22:42251190	A/T	SREBF2	intron	0.986	0.96483	0.0166	0.03065		6
rs74409678	22:42290490	T/C	SREBF2	intron	0.929	1.12457	0.0495	0.0178		5
rs74823524	22:42255705	A/G	SREBF2	intron	0.992	1.03614	0.0166	0.03208		5
rs74989989	22:42299817	T/C	SREBF2	intron	0.992	1.06940	0.0198	0.0006841		5
rs76302306	22:42244383	A/G	SREBF2	intron	0.716	0.97687	0.0380	0.5384		7
rs76902725	22:42233050	T/C	SREBF2	intron	0.887	0.94961	0.0223	0.02048		7
rs77463446	22:42244845	T/G	SREBF2	intron	0.861	0.95018	0.0431	0.236		4
rs78290111	22:42280064	I2/D	SREBF2	intron	0.972	0.96725	0.0111	0.002863		-
rs78302660	22:42261360	T/C	SREBF2	intron	0.852	1.04854	0.0286	0.09706		7
rs78515603	22:42257020	T/C	SREBF2	intron	0.993	1.17081	0.0517	0.00228		5
rs78815780	22:42266168	T/G	SREBF2	intron	0.993	1.03728	0.0166	0.02705		6
rs80033951	22:42243582	A/G	SREBF2	intron	0.739	1.01725	0.0425	0.6871		5
rs80094991	22:42248289	T/C	SREBF2	intron	0.886	1.15569	0.0297	1.066E-6		6
rs80230005	22:42297922	A/G	SREBF2	intron	0.991	0.93417	0.0198	0.0005738		4
rs8137847	22:42236153	A/G	SREBF2	intron	0.982	0.97609	0.0153	0.1145		7
rs8140722	22:42247932	A/G	SREBF2	intron	0.875	1.02357	0.0114	0.04116		7
rs8141218	22:42235219	C/G	SREBF2	intron	1.000	1.02870	0.0147	0.05397		5
rs8141414	22:42251053	A/C	SREBF2	intron	0.987	0.96012	0.0267	0.1274		7
rs9607850	22:42235352	T/C	SREBF2	intron	1.000	1.04907	0.0106	6.677E-6		1f
rs9607851	22:42246530	C/G	SREBF2	intron	0.991	0.85556	0.0517	0.002549		7
rs9607852	22:42258272	A/G	SREBF2	intron	0.991	1.04321	0.0267	0.1132		4
rs9607853	22:42267196	T/C	SREBF2	intron	0.994	1.04550	0.0268	0.09658		7
rs9607854	22:42280285	A/G	SREBF2	intron	0.991	1.16894	0.0516	0.002513		5
rs9611677	22:42247356	T/G	SREBF2	intron	0.991	0.85539	0.0517	0.002519		7
rs9611678	22:42255802	T/C	SREBF2	intron	0.992	0.85411	0.0517	0.002283		5
rs9611679	22:42257693	A/G	SREBF2	intron	0.990	1.04206	0.0267	0.1224		7
rs9611683	22:42269128	A/G	SREBF2	intron	0.994	1.04540	0.0268	0.09741		6
rs9611685	22:42273933	T/C	SREBF2	intron	0.991	1.17363	0.0516	0.001897		5
rs9611686	22:42275415	A/G	SREBF2	intron	0.992	0.95628	0.0268	0.09519		6
rs9623461	22:42260169	T/C	SREBF2	intron	0.996	1.04123	0.0267	0.1306		6
rs9623465	22:42274034	T/G	SREBF2	coding-synon,ncRNA	0.866	1.03821	0.0244	0.125		5
rs9623466	22:42281149	T/G	SREBF2	intron	0.994	0.95609	0.0267	0.09203		5
rs9623467	22:42281255	A/C	SREBF2	intron	0.993	1.04592	0.0267	0.09194		5
rs9623468	22:42281294	A/G	SREBF2	intron	0.997	0.95237	0.0265	0.06559		5
rs9623469	22:42281587	T/C	SREBF2	intron	0.994	1.04666	0.0267	0.08744		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information