STT3A

Basic Information

Gene Symbol	STT3A
Entrez Id	3703
Position	chr11:125462739..125491280
Description	STT3A, subunit of the oligosaccharyltransferase complex (catalytic)
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs10082554	11:125467890	T/C	STT3A	intron	0.991	0.98669	0.0213	0.5287		6
rs10082632	11:125465862	T/C	STT3A	coding-synon,intron	1.000	1.01735	0.0210	0.4128		7
rs10082633	11:125467884	A/G	STT3A	intron	0.874	1.02953	0.0213	0.1717		7
rs10082634	11:125466010	T/G	STT3A	intron	1.000	1.01735	0.0210	0.4134		6
rs10893404	11:125472616	T/C	STT3A	intron	1.010	1.02061	0.0212	0.3346		5
rs111252746	11:125489007	T/C	STT3A	intron	1.010	0.97492	0.0215	0.2361		6
rs11220147	11:125468077	A/T	STT3A	intron	1.000	0.98216	0.0210	0.3915		6
rs113436121	11:125478666	T/C	STT3A	intron	0.763	1.05422	0.0437	0.2273		7
rs116855567	11:125471770	T/C	STT3A	intron	1.000	1.02747	0.0218	0.2137		6
rs117458455	11:125465062	T/C	STT3A	intron	0.917	0.92127	0.0372	0.02753		3b
rs11822999	11:125472442	T/C	STT3A	intron	1.010	0.97990	0.0212	0.3377		6
rs11823046	11:125472543	A/G	STT3A	intron	1.010	0.97990	0.0212	0.3377		5
rs11825580	11:125481834	A/G	STT3A	intron	1.010	0.97873	0.0211	0.3102		7
rs12273327	11:125469430	T/C	STT3A	intron	0.989	0.98098	0.0215	0.3722		6
rs12273337	11:125469512	T/C	STT3A	intron	1.010	0.97981	0.0212	0.3355		7
rs12273364	11:125469341	C/G	STT3A	intron	1.000	0.97990	0.0212	0.3386		5
rs12273369	11:125469371	A/G	STT3A	intron	1.010	0.97922	0.0212	0.322		5
rs12275258	11:125470426	T/G	STT3A	intron	1.010	0.97990	0.0212	0.3376		6
rs12275383	11:125470646	A/G	STT3A	intron	1.010	0.97990	0.0212	0.3373		7
rs12275438	11:125470718	A/G	STT3A	intron	1.010	0.97990	0.0212	0.3373		7
rs12276635	11:125476569	T/C	STT3A	intron	0.970	0.98876	0.0223	0.6135		5
rs12280233	11:125469264	T/G	STT3A	intron	1.010	1.02183	0.0212	0.3085		5
rs12282789	11:125474456	T/G	STT3A	intron	1.010	0.97981	0.0212	0.336		6
rs12282800	11:125474500	T/G	STT3A	intron	1.010	0.97981	0.0212	0.336		6
rs12284570	11:125475440	C/G	STT3A	intron	1.010	1.02061	0.0212	0.335		7
rs12284615	11:125468367	A/C	STT3A	intron	1.010	1.02061	0.0212	0.3355		6
rs12284664	11:125475443	A/G	STT3A	intron	1.010	0.97981	0.0212	0.3355		7
rs12284897	11:125468824	A/G	STT3A	intron	1.010	1.02061	0.0212	0.3356		5
rs12285032	11:125476111	A/G	STT3A	intron	1.010	0.98010	0.0212	0.3418		7
rs12287246	11:125487666	T/C	STT3A	intron	1.010	0.97873	0.0211	0.3102		7
rs12289190	11:125466001	A/G	STT3A	intron	1.000	1.01735	0.0210	0.4133		6
rs12289594	11:125474348	T/C	STT3A	intron	1.010	1.02061	0.0212	0.3358		6
rs12289897	11:125483885	A/G	STT3A	intron	1.010	0.97961	0.0211	0.3296		7
rs12362754	11:125478547	T/C	STT3A	intron	0.998	1.04196	0.0115	0.0003487		7
rs12363701	11:125475355	A/G	STT3A	intron	0.648	1.01056	0.0651	0.8723		7
rs12365334	11:125475993	T/C	STT3A	intron	0.961	0.95018	0.0488	0.2948		7
rs12421948	11:125491899	T/C	STT3A	untranslated-3	0.981	0.99074	0.0150	0.5336		7
rs12577384	11:125477638	A/G	STT3A	intron	0.996	0.97006	0.0109	0.005384		7
rs138871024	11:125478344	C/G	STT3A	intron	1.000	0.97113	0.0218	0.1783		-
rs140516733	11:125471473	A/G	STT3A	intron	0.696	0.95437	0.0505	0.3554		-
rs141900946	11:125466279	A/G	STT3A	intron	0.883	0.98196	0.0431	0.6727		-
rs145949837	11:125466274	T/C	STT3A	intron	0.726	1.02521	0.0497	0.6163		-
rs17140116	11:125488404	T/C	STT3A	coding-synon	1.010	0.97863	0.0211	0.3069		5
rs17140175	11:125491284	A/G	STT3A	untranslated-3	1.000	1.02132	0.0211	0.3184		7
rs186531355	11:125479576	T/C	STT3A	intron	0.725	0.94724	0.0673	0.4209		-
rs2241501	11:125479496	T/C	STT3A	intron	0.998	1.04196	0.0115	0.0003478		5
rs2241502	11:125479363	A/G	STT3A	coding-synon	0.997	1.03179	0.0109	0.004125		5
rs2702023	11:125465020	C/G	STT3A	intron	0.984	1.00080	0.0107	0.943		5
rs28440826	11:125480654	A/C	STT3A	intron	0.989	1.04279	0.0116	0.000301		6
rs2846138	11:125492897	T/C	STT3A	near-gene-3	0.995	0.96783	0.0109	0.002787		6
rs2849223	11:125468803	T/C	STT3A	intron	0.990	1.01197	0.0106	0.2625		5
rs34079079	11:125482982	T/C	STT3A	coding-synon	0.807	1.00381	0.0357	0.9145		7
rs34566886	11:125482239	A/C	STT3A	intron	0.999	0.95964	0.0115	0.0003378		6
rs34964592	11:125476252	C/G	STT3A	coding-synon	1.010	1.02051	0.0212	0.3379		7
rs3781764	11:125472042	C/G	STT3A	intron	0.995	1.04216	0.0115	0.0003366		6
rs3781765	11:125487568	A/C	STT3A	intron	0.998	1.03169	0.0109	0.004267		7
rs473468	11:125491585	A/G	STT3A	untranslated-3	0.998	1.03169	0.0109	0.004289		5
rs477961	11:125477378	T/C	STT3A	intron	0.991	0.98659	0.0106	0.2018		5
rs479967	11:125485368	A/G	STT3A	intron	0.994	1.01157	0.0106	0.2758		6
rs490602	11:125482037	T/C	STT3A	intron	0.974	0.98847	0.0107	0.2755		6
rs497344	11:125470524	T/C	STT3A	intron	0.997	0.96445	0.0164	0.02694		6
rs498667	11:125469879	T/C	STT3A	intron	0.990	0.98659	0.0106	0.2005		6
rs505232	11:125492296	A/T	STT3A	untranslated-3	0.999	1.04206	0.0115	0.0003404		6
rs513209	11:125467144	A/C	STT3A	intron	0.927	1.03252	0.0163	0.04905		6
rs525186	11:125489788	A/C	STT3A	intron	0.998	0.96918	0.0109	0.004206		6
rs6590151	11:125470690	T/C	STT3A	intron	0.995	0.95954	0.0115	0.0003368		6
rs6590152	11:125477887	A/G	STT3A	intron	0.998	1.04196	0.0115	0.000353		7
rs6590153	11:125478209	T/C	STT3A	intron	0.997	1.03179	0.0109	0.004186		6
rs66730550	11:125480567	T/C	STT3A	intron	0.998	0.96928	0.0109	0.004269		7
rs67402595	11:125480553	C/G	STT3A	intron	0.998	1.04227	0.0115	0.0003219		7
rs693615	11:125492928	T/C	STT3A	near-gene-3	0.994	1.01025	0.0260	0.6957		6
rs7113694	11:125469975	T/C	STT3A	intron	0.966	0.97151	0.0111	0.009516		7
rs7115074	11:125473996	A/G	STT3A	intron	1.010	0.97981	0.0212	0.3362		6
rs726059	11:125477310	A/G	STT3A	intron	0.996	1.03200	0.0110	0.003973		5
rs726060	11:125477067	A/G	STT3A	intron	0.996	1.03138	0.0109	0.004668		7
rs726061	11:125477021	A/T	STT3A	intron	0.997	0.96002	0.0115	0.0003908		7
rs73019766	11:125468916	A/G	STT3A	intron	0.934	1.01207	0.0355	0.7356		7
rs73019769	11:125470572	A/G	STT3A	intron	0.760	0.89880	0.0662	0.107		6
rs73019783	11:125477895	A/G	STT3A	intron	0.772	0.89154	0.0577	0.04659		7
rs74640759	11:125480593	A/T	STT3A	intron	1.000	1.02132	0.0212	0.3186		6
rs74831629	11:125477000	T/C	STT3A	intron	0.965	1.02010	0.0449	0.6578		7
rs74832699	11:125471553	T/C	STT3A	intron	1.010	1.02051	0.0212	0.3374		6
rs75243275	11:125472061	T/C	STT3A	intron	1.010	1.02051	0.0212	0.3376		7
rs76129911	11:125478814	A/G	STT3A	intron	1.010	0.97912	0.0211	0.3191		6
rs77256447	11:125477311	T/C	STT3A	intron	1.000	0.97765	0.0216	0.2963		5
rs77291826	11:125464045	T/G	STT3A	intron	0.998	0.97990	0.0214	0.3417		6
rs77506332	11:125487195	T/C	STT3A	intron	1.010	1.02173	0.0211	0.3098		6
rs77584313	11:125473721	T/C	STT3A	intron	1.000	1.02747	0.0218	0.2125		5
rs78574330	11:125466676	T/G	STT3A	intron	1.000	0.97941	0.0213	0.3284		7
rs79017058	11:125465905	T/G	STT3A	intron	1.000	0.97883	0.0213	0.3153		7
rs79148226	11:125463327	T/G	STT3A	intron	0.995	0.98010	0.0214	0.3486		4
rs7931989	11:125478239	T/C	STT3A	intron	1.010	0.97932	0.0211	0.3219		6
rs79588668	11:125468438	A/C	STT3A	intron	1.010	0.97668	0.0215	0.2716		7
rs80101840	11:125482650	A/G	STT3A	intron	1.010	0.97424	0.0215	0.2252		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information