TMEM219

Basic Information

Gene Symbol	TMEM219
Entrez Id	124446
Position	chr16:29973351..29984373
Description	transmembrane protein 219
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs117077416	16:29971913	A/G	TMEM219	near-gene-5	0.685	1.11405	0.0303	0.0003742		6
rs12445982	16:29982484	A/G	TMEM219	intron	0.995	0.93594	0.0106	4.439E-10		7
rs12918340	16:29978805	A/G	TMEM219	intron	0.837	1.05075	0.0147	0.0007765		6
rs12934406	16:29982566	T/C	TMEM219	intron	0.991	0.93651	0.0106	7.159E-10		6
rs141605662	16:29978198	A/G	TMEM219	intron	0.777	1.09068	0.0507	0.08681		-
rs143948379	16:29972399	A/G	TMEM219	near-gene-5	0.748	1.06109	0.0479	0.216		-
rs144151719	16:29978981	A/G	TMEM219	intron	0.616	0.99302	0.0312	0.8234		-
rs34049928	16:29983015	C/G	TMEM219	intron	0.881	1.08134	0.0303	0.009903		5
rs4787486	16:29977562	A/T	TMEM219	intron	0.996	1.06887	0.0106	3.319E-10		1f
rs4788201	16:29972690	T/C	TMEM219	near-gene-5	0.996	0.93538	0.0106	2.863E-10		1f
rs4788202	16:29978003	T/C	TMEM219	intron	0.996	0.93557	0.0106	3.305E-10		7
rs4788203	16:29978827	A/G	TMEM219	intron	0.971	0.93576	0.0108	7.336E-10		7
rs6565173	16:29974167	A/G	TMEM219	intron,ncRNA	0.996	0.93538	0.0106	2.976E-10		1b
rs76712312	16:29976076	T/C	TMEM219	intron	0.625	0.90529	0.0347	0.004092		4
rs9925102	16:29983148	T/C	TMEM219	intron	0.998	1.06833	0.0106	4.506E-10		6
rs9932196	16:29983119	T/G	TMEM219	intron	0.998	0.93585	0.0106	3.795E-10		6
rs9932702	16:29982961	T/C	TMEM219	intron	0.997	0.93604	0.0106	4.361E-10		1f
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

Reference	Study type	Sample size
19855392	Regional	4551 cases; 6391 controls
Reference	Study type	Sample size

eQTL Information