TNFRSF13C

Basic Information

Gene Symbol	TNFRSF13C
Entrez Id	115650
Position	chr22:42321036..42322821
Description	tumor necrosis factor receptor superfamily, member 13C
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs5996087	22:42321591	A/G	TNFRSF13C	intron	0.991	1.07262	0.0196	0.000349		5
rs61756766	22:42321451	A/G	TNFRSF13C	missense	0.631	0.96551	0.0699	0.6159		5
rs62240988	22:42320153	C/G	TNFRSF13C	near-gene-5	0.902	0.99511	0.0180	0.7871		7
rs7290134	22:42321251	A/G	TNFRSF13C	near-gene-5,untranslated-3	0.990	1.06301	0.0131	2.893E-6		1f
rs73165134	22:42322016	C/G	TNFRSF13C	intron	0.973	1.06673	0.0194	0.0008572		4
rs77874543	22:42322716	C/G	TNFRSF13C	missense	0.901	0.94686	0.0211	0.009816		2b
rs80243871	22:42320131	C/G	TNFRSF13C	near-gene-5	0.959	0.92997	0.0195	0.0002012		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information