TSR1

Basic Information

Gene Symbol	TSR1
Entrez Id	55720
Position	chr17:2225972..2240678
Description	TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs148491754	17:2230511	A/G	TSR1	intron	0.680	0.98255	0.0548	0.7485		-
rs186122936	17:2231986	A/G	TSR1	intron,near-gene-3	0.793	0.98413	0.0501	0.7496		-
rs2236376	17:2234005	T/C	TSR1	intron,near-gene-5	0.999	1.00692	0.0159	0.6656		5
rs2281726	17:2236404	T/C	TSR1	missense	0.999	0.99402	0.0159	0.7081		5
rs3785558	17:2237614	A/G	TSR1	intron	0.948	1.02675	0.0129	0.04063		5
rs4477758	17:2230386	T/C	TSR1	intron	0.951	0.98059	0.0112	0.081		6
rs59904243	17:2230416	T/G	TSR1	intron	0.988	0.99233	0.0160	0.6296		6
rs61743762	17:2238675	A/G	TSR1	coding-synon	0.735	1.02634	0.0374	0.4869		5
rs72821611	17:2231916	A/C	TSR1	intron	0.979	1.00471	0.0157	0.7627		6
rs78041417	17:2230767	A/G	TSR1	intron	0.792	0.98373	0.0501	0.7436		5
rs79597880	17:2238152	T/C	TSR1	missense	0.864	1.04697	0.0496	0.355		4
rs8080919	17:2231271	A/G	TSR1	intron	0.947	1.02204	0.0126	0.08377		7
rs8081053	17:2231342	A/G	TSR1	intron	0.946	1.02081	0.0126	0.1025		7
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information