VSIG2

Basic Information

Gene Symbol	VSIG2
Entrez Id	23584
Position	chr11:124617370..124622109
Description	V-set and immunoglobulin domain containing 2
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs2075712	11:124621241	A/C	VSIG2	intron	0.988	0.94686	0.0143	0.0001274		5
rs2075713	11:124617939	A/C	VSIG2	intron,near-gene-5	0.996	1.05527	0.0140	0.0001296		5
rs61910623	11:124617816	T/C	VSIG2	intron,near-gene-5	0.936	1.02000	0.0255	0.4381		5
rs61910624	11:124620384	T/C	VSIG2	intron	0.930	0.97971	0.0255	0.4212		5
rs61910625	11:124620587	T/C	VSIG2	intron	0.992	0.94526	0.0142	0.00007722		5
rs626260	11:124620238	A/G	VSIG2	intron	0.848	1.04019	0.0287	0.1705		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information