WDR55

Basic Information

Gene Symbol	WDR55
Entrez Id	54853
Position	chr5:140044384..140050553
Description	WD repeat domain 55
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs138246154	5:140045356	A/G	WDR55	intron,near-gene-5	0.901	1.00632	0.0355	0.8589		-
rs144032011	5:140046170	A/G	WDR55	intron,untranslated-5	0.698	0.98246	0.0689	0.7975		-
rs181858502	5:140044330	A/G	WDR55	near-gene-5	0.793	1.01217	0.0473	0.7986		-
rs2251860	5:140048209	T/C	WDR55	coding-synon,untranslated-5	1.000	0.95753	0.0105	0.00003744		5
rs2286394	5:140048544	T/C	WDR55	missense	0.999	1.03998	0.0122	0.001308		6
rs2302104	5:140047600	T/C	WDR55	intron	0.999	1.04164	0.0122	0.0008397		6
rs2530246	5:140047011	C/G	WDR55	intron	1.000	1.02675	0.0129	0.04045		5
rs2530247	5:140045016	A/T	WDR55	intron,near-gene-5	1.000	1.02634	0.0129	0.04349		4
rs2563311	5:140046435	A/G	WDR55	intron,untranslated-5	1.000	0.97453	0.0129	0.04493		6
rs2563312	5:140046939	T/C	WDR55	intron	0.962	1.02757	0.0164	0.09788		5
rs2563314	5:140047289	A/G	WDR55	intron	1.000	0.95456	0.0105	0.00001017		7
rs2563335	5:140044292	A/C	WDR55	near-gene-5	1.000	1.04760	0.0105	0.00001016		1f
rs34678418	5:140043350	T/C	WDR55	near-gene-5	1.000	1.02624	0.0129	0.04404		7
rs35614340	5:140043618	C/G	WDR55	near-gene-5	1.000	0.95456	0.0105	0.00001017		7
rs35983033	5:140048707	A/G	WDR55	missense	0.927	0.97268	0.0199	0.1638		7
rs58669846	5:140045994	C/G	WDR55	intron,near-gene-5	1.000	0.96117	0.0122	0.001166		6
rs78582690	5:140043964	A/G	WDR55	near-gene-5	0.822	1.02051	0.0480	0.672		4
rs79561914	5:140043965	T/C	WDR55	near-gene-5	0.822	1.02051	0.0480	0.672		4
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information