XBP1

Basic Information

Gene Symbol	XBP1
Entrez Id	7494
Position	chr22:29190548..29196560
Description	X-box binding protein 1
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs112927931	22:29196043	I2/D	XBP1	intron	0.998	0.98472	0.0214	0.4722		-
rs138290856	22:29196534	A/C	XBP1	untranslated-5	0.960	1.07122	0.0363	0.05795		-
rs2097461	22:29191879	T/C	XBP1	intron	0.995	0.96445	0.0113	0.001416		7
rs2239815	22:29192670	T/C	XBP1	intron	0.995	0.96522	0.0113	0.001773		2b
rs2269575	22:29196526	A/G	XBP1	untranslated-5	0.974	0.98432	0.0212	0.4578		4
rs34718288	22:29194797	C/G	XBP1	intron	0.999	0.95801	0.0152	0.004905		5
rs35873774	22:29191932	A/G	XBP1	intron	0.998	0.96561	0.0220	0.1114		5
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information