ZKSCAN4

Basic Information

Gene Symbol	ZKSCAN4
Entrez Id	387032
Position	chr6:28212490..28220002
Description	zinc finger with KRAB and SCAN domains 4
Gene type	protein-coding

SNP Information

SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*
rs112863641	6:28217931	T/C	ZKSCAN4	intron,near-gene-5	1.000	0.98118	0.0198	0.3362		6
rs115815993	6:28217831	T/G	ZKSCAN4	intron,near-gene-5	0.956	0.90493	0.0331	0.002586		6
rs13200462	6:28218199	A/C	ZKSCAN4	intron,near-gene-5	1.000	1.14328	0.0157	1.591E-17		7
rs1736895	6:28219826	A/G	ZKSCAN4	intron,untranslated-5	1.000	0.93632	0.0108	9.573E-10		4
rs17720293	6:28214698	T/C	ZKSCAN4	intron	1.010	0.83427	0.0181	1.113E-23		6
rs182022782	6:28214427	A/C	ZKSCAN4	intron	0.821	1.03769	0.0313	0.2378		-
rs2235358	6:28216027	A/G	ZKSCAN4	intron	0.998	1.00823	0.0255	0.7469		7
rs2235359	6:28215641	T/G	ZKSCAN4	intron	1.010	1.03221	0.0153	0.03829		7
rs41269287	6:28213918	A/G	ZKSCAN4	intron	0.825	1.03821	0.0314	0.2326		7
rs62401443	6:28214646	T/C	ZKSCAN4	intron	0.627	0.92441	0.0412	0.05665		7
rs68141011	6:28217797	T/G	ZKSCAN4	intron,near-gene-5	1.000	0.87433	0.0157	1.27E-17		7
rs78655767	6:28216846	A/T	ZKSCAN4	intron	0.990	0.87468	0.0558	0.01641		5
rs9986596	6:28219661	A/G	ZKSCAN4	intron,missense	0.991	0.87398	0.0157	1.06E-17		4
SNP	Position	Alelle	Gene	Annotation	Info	Or	Se	P-value	eQTL	Score^*

Note: RegulomeDB score^*

score	supporting data	score	supporting data
1a	eQTL + TF binding + matched TF motif + matched DNase Footprint + DNase peak	6	other
2a	TF binding + matched TF motif + matched DNase Footprint + DNase peak	5	TF binding or DNase peak
1b	eQTL + TF binding + any motif + DNase Footprint + DNase peak	4	TF binding + DNase peak
2b	TF binding + any motif + DNase Footprint + DNase peak	3b	TF binding + matched TF motif
1c	eQTL + TF binding + matched TF motif + DNase peak	1f	eQTL + TF binding / DNase peak
2c	TF binding + matched TF motif + DNase peak	3a	TF binding + any motif + DNase peak
1d	eQTL + TF binding + any motif + DNase peak	1e	eQTL + TF binding + matched TF motif

CNV Information

The gene is not affected by CNV!

eQTL Information